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Update dependencies and development tools #26

Merged
merged 4 commits into from
Feb 2, 2024
Merged

Update dependencies and development tools #26

merged 4 commits into from
Feb 2, 2024

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eicca
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@eicca eicca commented Jan 29, 2024

This PR updates the dependencies, relaxes the version constraints and updates the development tools and workflows.

Changes:

  • numba is updated to 0.58 to allow for the newer numpy version
  • numpy version range is adapted accordingly to numba's requirements
  • python 3.11 is allowed
  • pandas version is relaxed to allow for pandas >= 2
    • added additional CI pipeline for pandas 2
  • mypy is updated and enabled on CI
    • all type hints are now fixed
  • black, flake8 and isort are replaced by ruff
    • the entire codebase is now formatted and linted with ruff
    • the CI pipeline is updated accordingly

Closes #25

@eicca
Update dependencies and development tools
c075447 
This commit updates the dependencies, relaxes the version constraints and
updates the development tools and workflows.

Changes:
- numba is updated to 0.58 to allow for the newer numpy version
- numpy version range is adapted accordingly to numba's requirements
- python 3.11 is allowed
- pandas version is relaxed to allow for pandas >= 2
  * added additional CI pipeline for pandas 2
- mypy is updated and enabled on CI
  * all type hints are now fixed
- black, flake8 and isort are replaced by ruff
  * the entire codebase is now formatted and linted with ruff
  * the CI pipeline is updated accordingly
@eicca
Fix versions compatibility for CI.
b27ea4d
@eicca
Update pre-commit hooks to use ruff.
8dee512
@eicca eicca requested a review from nicola-v January 29, 2024 16:17
@eicca eicca self-assigned this Jan 29, 2024
nicola-v
nicola-v approved these changes Jan 30, 2024
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@nicola-v nicola-v left a comment

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Looks good to me!

.github/workflows/python-package.yml Show resolved Hide resolved
pyproject.toml Show resolved Hide resolved
pyproject.toml Show resolved Hide resolved
src/anonymeter/evaluators/inference_evaluator.py Show resolved Hide resolved
src/anonymeter/evaluators/singling_out_evaluator.py Show resolved Hide resolved
src/anonymeter/evaluators/singling_out_evaluator.py Show resolved Hide resolved
src/anonymeter/preprocessing/transformations.py Show resolved Hide resolved
src/anonymeter/stats/confidence.py Show resolved Hide resolved
tests/test_linkability_evaluator.py Show resolved Hide resolved
@eicca eicca enabled auto-merge February 2, 2024 09:53
@eicca eicca merged commit a2354c2 into main Feb 2, 2024
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@eicca eicca deleted the eicca/deps-update branch February 2, 2024 09:57
@eicca eicca mentioned this pull request Feb 2, 2024
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@nicola-v nicola-v nicola-v approved these changes

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Successfully merging this pull request may close these issues.

Update Dependency to Require pandas 2.0 or Higher
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@eicca @nicola-v