Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fixes for non-ASCII name list fields in toBiblatex and toBibtex #112

Open
wants to merge 9 commits into
base: master
Choose a base branch
from

Commits on Oct 15, 2024

  1. Remove appveyor CI

    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    71530bd View commit details
    Browse the repository at this point in the history
  2. Avoid msg about page numbers in ReadPDFs for 1page PDFs

    * Always use pdfinfo to determine number of pages in each PDF in ReadPDFs
    even when use.metadata is FALSE
    * This avoids a message from pdftotext about incorrect pages
    * Refactor test-readPDF.R to make it clearer when tests are skipped
    if poppler is not installed
    
    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    ef99ffd View commit details
    Browse the repository at this point in the history
  3. Fix pkg documentation for latest roxygen2

    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    601b0f3 View commit details
    Browse the repository at this point in the history
  4. Fixes for non-ASCII name list fields in toBiblatex and toBibtex

    * Add latexify() from dplR instead of tools::encoded_text_to_latex
    to improve conversion of non-ASCII characters to valid latex
    * Fixes #102, #105, #106
    
    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    3b11b05 View commit details
    Browse the repository at this point in the history
  5. Update documentation for latexify author

    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    19db238 View commit details
    Browse the repository at this point in the history
  6. Add website to DESCRIPTION

    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    5e4a9ee View commit details
    Browse the repository at this point in the history
  7. Use default value for rettype in ReadPubMed

    * c.f. https://www.ncbi.nlm.nih.gov/books/NBK25499/table/chapter4.T._valid_values_of__retmode_and/
    * Add mock response for one GetPubMedByID test
    
    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    622d0b5 View commit details
    Browse the repository at this point in the history
  8. Add more sleep for PubMed/Entrez test

    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 15, 2024
    Configuration menu
    Copy the full SHA
    bc3d030 View commit details
    Browse the repository at this point in the history

Commits on Oct 16, 2024

  1. Refactor GetPubMedByID tests

    * Attempt each GetPubMedByID test once with the entrez api,
    then use a cached/mock response if the request fails; add a
    failed test if all tests with API result in http errors
    
    Signed-off-by: Mathew W. McLean <[email protected]>
    mwmclean committed Oct 16, 2024
    Configuration menu
    Copy the full SHA
    1f07f05 View commit details
    Browse the repository at this point in the history