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Workflow file for this run

name: tests
on:
push:
branches:
- "main"
tags:
- "*"
pull_request:
workflow_dispatch:
inputs:
coredev:
description: 'Tests with development version of cellfinder-core?'
required: true
default: 'false'
env:
REGISTRY: ghcr.io
IMAGE_NAME: ${{ github.repository }}
jobs:
linting:
name: Linting
runs-on: ubuntu-latest
steps:
- uses: neuroinformatics-unit/actions/lint@v2
manifest:
name: Check manifest
runs-on: ubuntu-latest
steps:
- uses: neuroinformatics-unit/actions/check_manifest@v2
test:
needs: [linting,manifest]
runs-on: ${{ matrix.os }}
env:
INPUT_COREDEV: ${{ github.event.inputs.coredev }}
strategy:
fail-fast: false
matrix:
# Run across a mixture of Python versions and operating systems
include:
- os: macos-latest
python-version: "3.10"
- os: windows-latest
python-version: "3.9"
- os: ubuntu-latest
python-version: "3.8"
steps:
- uses: neuroinformatics-unit/actions/test@v2
with:
python-version: ${{ matrix.python-version }}
build_sdist_wheels:
name: Build source distribution
needs: [test]
if: github.event_name == 'push' && github.ref_type == 'tag'
runs-on: ubuntu-latest
steps:
- uses: neuroinformatics-unit/actions/build_sdist_wheels@v2
deploy:
needs: [build_sdist_wheels]
runs-on: ubuntu-latest
if: github.event_name == 'push' && github.ref_type == 'tag'
steps:
- uses: actions/download-artifact@v3
with:
name: artifact
path: dist
- uses: pypa/[email protected]
with:
user: __token__
password: ${{ secrets.TWINE_API_KEY }}
build-and-push-docker:
needs: deploy
runs-on: ubuntu-latest
permissions:
contents: read
packages: write
steps:
- name: Checkout repository
uses: actions/checkout@v2
- name: Log in to the Container registry
uses: docker/login-action@f054a8b539a109f9f41c372932f1ae047eff08c9
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@98669ae865ea3cffbcbaa878cf57c20bbf1c6c38
with:
images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
- name: Build and push Docker image
uses: docker/build-push-action@ad44023a93711e3deb337508980b4b5e9bcdc5dc
with:
context: .
push: true
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}