Skip to content

Issues: antigenomics/vdjdb-db

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

80 Open 194 Closed
80 Open 194 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

PMID: 39394480
#396 opened Oct 29, 2024 by LuppovDaniil
pgen as vdjdb score vdjdb-build-infrastructure VDJdb aggregation, compilation and proofreading infrastructure development
#395 opened Oct 29, 2024 by LuppovDaniil
@LuppovDaniil
Wrong HLA info for "ASNENMETM" epitope vdjdb-typos Minor typos to fix
#394 opened Oct 9, 2024 by dagfeller
@LuppovDaniil
1
CI/CD vdjdb-build-infrastructure VDJdb aggregation, compilation and proofreading infrastructure development
#393 opened Sep 25, 2024 by LuppovDaniil
@LuppovDaniil
PMID:39286976 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#392 opened Sep 23, 2024 by LuppovDaniil
@LuppovDaniil
PMID: 39258910
#391 opened Sep 17, 2024 by LuppovDaniil
duplicated dataset duplicate A duplicate issue
#390 opened Sep 16, 2024 by LuppovDaniil
VDJ genes nomenclature vdjdb-build-infrastructure VDJdb aggregation, compilation and proofreading infrastructure development
#389 opened Sep 10, 2024 by LuppovDaniil
@LuppovDaniil
PMID:36778273 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#388 opened Aug 29, 2024 by LuppovDaniil
PMID:39043656 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#387 opened Aug 29, 2024 by LuppovDaniil
PMID:38898278 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#385 opened Aug 29, 2024 by LuppovDaniil
PMID:34811538 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#382 opened Aug 7, 2024 by LuppovDaniil
PMID:34433824 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#381 opened Aug 1, 2024 by LuppovDaniil
@LuppovDaniil
PMID:39074636 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#380 opened Aug 1, 2024 by LuppovDaniil
@LuppovDaniil
PMID:25157096 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#379 opened Aug 1, 2024 by LuppovDaniil
PMID:38866784 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#377 opened Jun 15, 2024 by LuppovDaniil
@LuppovDaniil
PMID:38744246 vdj-10x-immudex scRNA-seq dataset prepared using 10X Genomics kit (or similar) + UMI-tagged MHC-multimers vdjdb-records-associations Inferred (directly or indirectly) antigen receptor:condition associations.
#376 opened Jun 9, 2024 by mikessh
PMID:38762592 vdj-10x scRNA-seq dataset prepared using 10X Genomics kit (or similar) with TCR/BCR vdjdb-records-associations Inferred (directly or indirectly) antigen receptor:condition associations.
#375 opened Jun 9, 2024 by mikessh
Re-evaluate HLA restriction vdjdb-build-summary VDJdb summary report generation infrastructure development vdjdb-records-formatting&proofreading Typos and errors that need to be fixed in one or multiple VDJdb records
#372 opened Jun 1, 2024 by mikessh
Associations from previously published studies, aggregated and listed elsewhere vdjdb-records-associations Inferred (directly or indirectly) antigen receptor:condition associations. vdjdb-records-meta-paper A paper listing several studies and datasets that can be imported into VDJdb
#371 opened Jun 1, 2024 by mikessh
PMID:38571941 vdjdb-records-associations Inferred (directly or indirectly) antigen receptor:condition associations. vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#370 opened Jun 1, 2024 by mikessh
antigen.gene / antigen.species mix up for some human epitopes vdjdb-records-formatting&proofreading Typos and errors that need to be fixed in one or multiple VDJdb records
#368 opened May 30, 2024 by JamieHeather
1
PMID:38508137 vdjdb-records-paper A published study listing TCRs and cognate antigens with PubMed ID
#367 opened May 30, 2024 by mikessh
@mikessh @LuppovDaniil
Migrate build from Docker to Podman vdjdb-build-infrastructure VDJdb aggregation, compilation and proofreading infrastructure development vdjdb-maintainance Critical issues requiring complex maintenance works
#366 opened May 30, 2024 by mikessh
@LuppovDaniil
Structural data update vdjdb-records-dataset A dataset of antigen receptors and cognate antigens, e.g. publicly available 10X+Immudex assay data vdjdb-records-formatting&proofreading Typos and errors that need to be fixed in one or multiple VDJdb records
#365 opened May 25, 2024 by mikessh
ProTip! Find all open issues with in progress development work with linked:pr.