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Merge pull request #17 from NBISweden/lokesh-pinus
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Pinus SNP app
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lokeshbio authored Feb 2, 2022
2 parents a5c07eb + a4338ea commit 7d0eb74
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198 changes: 94 additions & 104 deletions web/apps/index.html
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<!DOCTYPE html>
<html>

<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8"/>
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1.0, user-scalable=no" />
<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1.0, user-scalable=no"/>

<title>NBIS Rshiny Apps</title>
<meta name="description" content="Rshiny server supported by National
Bioinformatics Infrastructure Sweden
">

<link rel="canonical" href="http://rshiny.nbis.se/">
<link rel="alternate" type="application/rss+xml" title="NBIS - National Bioinformatics Infrastructure Sweden"
href="https://nbis.se/feed.xml">
<link rel="alternate" type="application/rss+xml" title="NBIS - National Bioinformatics Infrastructure Sweden" href="https://nbis.se/feed.xml">
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<!-- Custom Fonts -->
<link
href='http://fonts.googleapis.com/css?family=Open+Sans:300italic,400italic,600italic,700italic,800italic,400,300,600,700,800'
rel='stylesheet' type='text/css'>
<link
href='http://fonts.googleapis.com/css?family=Merriweather:400,300,300italic,400italic,700,700italic,900,900italic'
rel='stylesheet' type='text/css'>
<!-- Custom Fonts -->
<link href='http://fonts.googleapis.com/css?family=Open+Sans:300italic,400italic,600italic,700italic,800italic,400,300,600,700,800' rel='stylesheet' type='text/css'>
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<link href="/css/main.css" type="text/css" rel="stylesheet" media="screen,projection"/>

<link href="/css/main.css" type="text/css" rel="stylesheet" media="screen,projection" />

</head>

<body>
<body>

<div class="section" style="margin-bottom:80px">
<div class="section" style="margin-bottom:80px" >
<div class="container" style="margin-bottom:24px">
<p class="black-text text-lighten-4">
<font size=6>
List of Rshiny Apps
</font>
</p>
<ul>
<li>
<a href="/shiny-server-apps/shiny-apps-scrnaseq/igraph_3D/">igraph_3D</a>
(3D igraph from tsne with variable genes)
</li>
<li>
<a href="/shiny-server-apps/MetaMEx">MetaMEx</a>
(Transcriptomics meta-analysis of skeletal muscle response to exercise)
<a href="https://github.com/NicoPillon/MetaMEx">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/pophelperShiny/inst/app">pophelperShiny</a>
(Analyse and visualise admixture proportions)
<a href="https://github.com/royfrancis/pophelperShiny">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/shiny-nametagger">nametagger</a>
(Print labels for clip-on nametags)
<a href="https://github.com/royfrancis/shiny-nametagger">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/rshiny-support-5065">Support 5065</a>
(Single Cell RNA seq visualizing)
<a href="https://github.com/NBISweden/rshiny-support-5065">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/rshiny-support-4884">Support 4884</a>
(Single Cell RNA seq visualizing)
<a href="https://github.com/NBISweden/support-4884">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/shiny-certificate">Shiny-Certificate</a>
(NBIS Course certificate)
<a href="https://github.com/royfrancis/shiny-certificate">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/shiny-doorsign">Door Sign</a>
(Name signage for offices)
<a href="https://github.com/royfrancis/shiny-doorsign">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/shiny-rnaseq-power">RNA-Seq power</a>
(Power analysis for RNA-Seq experiments)
<a href="https://github.com/royfrancis/shiny-rnaseq-power">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/o_andersson">LTS project o_andersson</a>
(scRNA-seq data in o_andersson_1709)
<a href="https://bitbucket.org/scilifelab-lts/o_andersson_1709/src/master/source/anna_shiny">Bitbucket repo</a>
</li>
<li>
<a href="/shiny-server-apps/nhp_shiny">Support 5582</a>
(Single Cell RNA sequencing visualization)
<a href="https://github.com/alexander-7/nhp_shiny">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/natural-nations">Natural Nations</a>
(CitizenScience Project)
<a href="https://github.com/NBISweden/natural-nations">GitHub repo</a>
</li>
<li>
<a href="/shiny-server-apps/rshiny-support-5860">Support 5860</a>
(Single Cell RNA seq visualizing)
<a href="https://github.com/NBISweden/support-5860">GitHub repo</a>
</li>
</ul>
<p class="black-text text-lighten-4">
<font size=6>
List of Rshiny Apps
</font>
</p>
<ul>
<li><a href="/shiny-server-apps/shiny-apps-scrnaseq/igraph_3D/">igraph_3D</a>
(3D igraph from tsne with variable genes)
</li>
<li><a href="/shiny-server-apps/MetaMEx">MetaMEx</a>
(Transcriptomics meta-analysis of skeletal muscle response to
exercise)
<a href="https://github.com/NicoPillon/MetaMEx">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/pophelperShiny/inst/app">pophelperShiny</a>
(Analyse and visualise admixture proportions)
<a href="https://github.com/royfrancis/pophelperShiny">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/zage">zage</a>
(Plan Illumina sequencing experiment)
<a href="https://github.com/royfrancis/zage">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/shiny-nametagger">nametagger</a>
(Print labels for clip-on nametags)
<a href="https://github.com/royfrancis/shiny-nametagger">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/rshiny-support-5065">support5065</a>
(Single Cell RNA seq visualizing)
<a href="https://github.com/NBISweden/rshiny-support-5065">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/rshiny-support-4884">support4884</a>
(Single Cell RNA seq visualizing)
<a href="https://github.com/NBISweden/rshiny-support-4884">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/shiny-certificate">Shiny-Certificate</a>
(NBIS Course certificate)
<a href="https://github.com/royfrancis/shiny-certificate">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/shiny-doorsign">Door Sign</a>
(Name signage for offices)
<a href="https://github.com/royfrancis/shiny-doorsign">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/o_andersson">LTS project
o_andersson</a>
(scRNA-seq data in o_andersson_1709)
<a
href="https://bitbucket.org/scilifelab-lts/o_andersson_1709/src/master/source/anna_shiny">Bitbucket repo</a>
</li>
<li><a href="/shiny-server-apps/nhp_shiny">support5582</a>
(Single Cell RNA sequencing visualization)
<a href="https://github.com/alexander-7/nhp_shiny">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/natural-nations">Natural Nations</a>
(CitizenScience Project)
<a href="https://github.com/NBISweden/natural-nations">GitHub repo</a>
</li>
<li><a href="/shiny-server-apps/pinus-snp">Pinus SNP Array</a>
(SMS 5290)
<a href="https://github.com/NBISweden/Pinus_ShinyApp">GitHub repo</a>
</li>
</ul>
</div>

<footer class="page-footer topborder">
<div id="funding" class="row" style="margin-bottom:0px">
<div class="center-block">
<p style="text-align:center;background-color:white">
<a href="http://www.scilifelab.se"><img alt="Scilifelab" src="/assets/img/logos/scilifelab.jpg"
style="height:40px;padding:5px 0px 5px 0px"></a>
<a href="https://nbis.se"><img alt="NBIS" src="/assets/img/logos/nbislogo-blue.svg"
style="height:40px;padding:5px 0px 5px 0px"></a>
</p>


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<a href="http://www.scilifelab.se"><img alt="Scilifelab" src="/assets/img/logos/scilifelab.jpg" style="height:40px;padding:5px 0px 5px 0px" ></a>
<a href="https://nbis.se"><img alt="NBIS" src="/assets/img/logos/nbislogo-blue.svg" style="height:40px;padding:5px 0px 5px 0px" ></a>
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54 changes: 27 additions & 27 deletions web/index.html
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<!DOCTYPE html>
<html>

<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8"/>
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1.0, user-scalable=no" />
<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1.0, user-scalable=no"/>

<title>Rshiny server for NBIS</title>
<meta name="description" content="Rshiny server supported by National
Bioinformatics Infrastructure Sweden
">

<link rel="canonical" href="http://rshiny.nbis.se/">
<link rel="alternate" type="application/rss+xml" title="NBIS - National Bioinformatics Infrastructure Sweden"
href="https://nbis.se/feed.xml">
<link rel="alternate" type="application/rss+xml" title="NBIS - National Bioinformatics Infrastructure Sweden" href="https://nbis.se/feed.xml">
<!-- CSS -->
<link href="https://fonts.googleapis.com/icon?family=Material+Icons" rel="stylesheet">
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/materialize/0.97.5/css/materialize.min.css">

<!-- Custom Fonts -->
<link
href='http://fonts.googleapis.com/css?family=Open+Sans:300italic,400italic,600italic,700italic,800italic,400,300,600,700,800'
rel='stylesheet' type='text/css'>
<link
href='http://fonts.googleapis.com/css?family=Merriweather:400,300,300italic,400italic,700,700italic,900,900italic'
rel='stylesheet' type='text/css'>
<!-- Custom Fonts -->
<link href='http://fonts.googleapis.com/css?family=Open+Sans:300italic,400italic,600italic,700italic,800italic,400,300,600,700,800' rel='stylesheet' type='text/css'>
<link href='http://fonts.googleapis.com/css?family=Merriweather:400,300,300italic,400italic,700,700italic,900,900italic' rel='stylesheet' type='text/css'>

<link href="/css/main.css" type="text/css" rel="stylesheet" media="screen,projection"/>

<link href="/css/main.css" type="text/css" rel="stylesheet" media="screen,projection" />

</head>

<body>
<body>


<!-- <div id="index-banner" class="parallax-container bottomborder"> -->
<!-- <div id="index-banner" class="parallax-container
bottomborder">-->

<!-- define dropdowns first -->
<!-- define dropdowns first --!>
<ul id="ddapp" class="dropdown-content">
<li><a href="/shiny-server-apps/shiny-apps-scrnaseq/igraph_3D/">igraph_3D</a></li>
<li><a href="/shiny-server-apps/MetaMEx">MetaMEx</a></li>
<li><a href="/shiny-server-apps/pophelperShiny/inst/app">pophelperShiny</a></li>
<li><a href="/shiny-server-apps/zage">zage</a></li>
<li><a href="/shiny-server-apps/shiny-nametagger">nametagger</a></li>
<li><a href="/shiny-server-apps/rshiny-support-5065">Support 5065</a></li>
<li><a href="/shiny-server-apps/rshiny-support-4884">Support 4884</a></li>
<li><a href="/shiny-server-apps/rshiny-support-5065">support5065</a></li>
<li><a href="/shiny-server-apps/rshiny-support-4884">support4884</a></li>
<li><a href="/shiny-server-apps/shiny-certificate">Course certificate</a></li>
<li><a href="/shiny-server-apps/shiny-doorsign">Door Sign</a></li>
<li><a href="/shiny-server-apps/shiny-rnaseq-power">RNA-Seq power</a></li>
<li><a href="/shiny-server-apps/o_andersson">LTS project o_andersson</a></li>
<li><a href="/shiny-server-apps/nhp_shiny">Support 5582</a></li>
<li><a href="/shiny-server-apps/nhp_shiny">support5582</a></li>
<li><a href="/shiny-server-apps/natural-nations">Natural Nations</a></li>
<li><a href="/shiny-server-apps/rshiny-support-5860">Support 5860</a></li>
<li><a href="/shiny-server-apps/pinus-snp">Pinus SNP Array</a></li>
</ul>

<nav class="z-depth-0 main transparent " role="navigation">
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Expand All @@ -72,8 +68,9 @@
<div class="container" style="margin-bottom:24px">
<p class="black-text text-lighten-4">
<font size=6>
Rshiny server for <a href="https://nbis.se">NBIS</a> (National Bioinformatics Infrastructure Sweden)
</font>
Rshiny server for <a href="https://nbis.se">NBIS</a> (National Bioinformatics Infrastructure
Sweden)
</font>
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Expand All @@ -97,12 +94,15 @@
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