Skip to content
@NBISweden

NBIS - National Bioinformatics Infrastructure Sweden

NBIS is a distributed national bioinformatics infrastructure, supporting life sciences in Sweden.

Pinned Loading

  1. MrBayes MrBayes Public

    MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:

    C 232 79

  2. EMBLmyGFF3 EMBLmyGFF3 Public

    An efficient way to convert gff3 annotation files into EMBL format ready to submit.

    Python 59 15

  3. development-guidelines development-guidelines Public

    Development guidlines for software within NBIS.

    17 8

  4. excelerate-scRNAseq excelerate-scRNAseq Public

    Single RNA-seq data analysis with R (Finland, May, 2019)

    HTML 216 107

  5. GAAS GAAS Public

    Genome Assembly and Annotation Service code

    Perl 200 46

  6. IgDiscover-legacy IgDiscover-legacy Public archive

    Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads

    Python 17 10

Repositories

Showing 10 of 296 repositories
  • workshop-scRNAseq-devel Public Forked from NBISweden/workshop-scRNAseq

    Single cell RNA sequencing analysis course

    NBISweden/workshop-scRNAseq-devel’s past year of commit activity
    HTML 0 98 0 0 Updated Oct 25, 2024
  • workshop-r Public

    Workshop • R Programming Foundations for Life Scientists • 5 days

    NBISweden/workshop-r’s past year of commit activity
    CSS 7 GPL-3.0 10 0 0 Updated Oct 25, 2024
  • sda-cli Public

    User command line interface for the SDA

    NBISweden/sda-cli’s past year of commit activity
    Go 5 AGPL-3.0 1 38 2 Updated Oct 25, 2024
  • workshop-reproducible-research Public

    NBIS/ELIXIR course: Tools for Reproducible Research

    NBISweden/workshop-reproducible-research’s past year of commit activity
    HTML 57 CC-BY-4.0 32 0 1 Updated Oct 25, 2024
  • strobealign-evaluation Public
    NBISweden/strobealign-evaluation’s past year of commit activity
    Python 0 0 0 0 Updated Oct 25, 2024
  • course_chipseq Public
    NBISweden/course_chipseq’s past year of commit activity
    HTML 1 3 0 0 Updated Oct 25, 2024
  • redmine_utils Public

    Various script used to manage Redmine.

    NBISweden/redmine_utils’s past year of commit activity
    Python 0 0 0 0 Updated Oct 25, 2024
  • workshop-ngsintro Public

    Workshop • Intro to Bioinformatics using NGS data • 5 days

    NBISweden/workshop-ngsintro’s past year of commit activity
    HTML 13 GPL-3.0 6 0 0 Updated Oct 25, 2024
  • Earth-Biogenome-Project-pilot Public

    Assembly and Annotation workflows for analysing data in the Earth Biogenome Project pilot project.

    NBISweden/Earth-Biogenome-Project-pilot’s past year of commit activity
    Nextflow 11 GPL-3.0 8 43 (1 issue needs help) 4 Updated Oct 24, 2024
  • PLP_Design_Portal Public

    This repository contains a package to create padlock probes that target RNA directly and for developing a user-friendly.portal

    NBISweden/PLP_Design_Portal’s past year of commit activity
    0 0 12 0 Updated Oct 22, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…