-
Notifications
You must be signed in to change notification settings - Fork 0
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Improved paragraph algorithm #118
Commits on Jan 9, 2023
-
Merge branch 'master' of https://github.com/uclh-criu/miade into dev
jenniferajiang committedJan 9, 2023 Configuration menu - View commit details
-
Copy full SHA for 2aade13 - Browse repository at this point
Copy the full SHA 2aade13View commit details
Commits on Jan 19, 2023
-
update git tag versioning changes from #70
jenniferajiang committedJan 19, 2023 Configuration menu - View commit details
-
Copy full SHA for fdd1993 - Browse repository at this point
Copy the full SHA fdd1993View commit details
Commits on Jan 31, 2023
-
added confidence to meta to match for API compatibility
jenniferajiang committedJan 31, 2023 Configuration menu - View commit details
-
Copy full SHA for e387e30 - Browse repository at this point
Copy the full SHA e387e30View commit details
Commits on Feb 1, 2023
-
jenniferajiang committed
Feb 1, 2023 Configuration menu - View commit details
-
Copy full SHA for f7d0b82 - Browse repository at this point
Copy the full SHA f7d0b82View commit details -
A little manual merge? added latest updated negex meta priority for t…
…esting
jenniferajiang committedFeb 1, 2023 Configuration menu - View commit details
-
Copy full SHA for 5a2a16b - Browse repository at this point
Copy the full SHA 5a2a16bView commit details
Commits on Feb 17, 2023
-
Merge branch 'feature/logging-config' into dev
jenniferajiang committedFeb 17, 2023 Configuration menu - View commit details
-
Copy full SHA for 3a072fc - Browse repository at this point
Copy the full SHA 3a072fcView commit details -
Merge branch 'feature/logging-config' into dev
jenniferajiang committedFeb 17, 2023 Configuration menu - View commit details
-
Copy full SHA for cce70e1 - Browse repository at this point
Copy the full SHA cce70e1View commit details -
jenniferajiang committed
Feb 17, 2023 Configuration menu - View commit details
-
Copy full SHA for 3405ae9 - Browse repository at this point
Copy the full SHA 3405ae9View commit details -
Merge branch 'feature/logging-config' into dev
jenniferajiang committedFeb 17, 2023 Configuration menu - View commit details
-
Copy full SHA for dbc5b62 - Browse repository at this point
Copy the full SHA dbc5b62View commit details
Commits on Feb 21, 2023
-
Merge branch 'hotfix-negex-config' into dev
jenniferajiang committedFeb 21, 2023 Configuration menu - View commit details
-
Copy full SHA for f9b46e0 - Browse repository at this point
Copy the full SHA f9b46e0View commit details
Commits on Mar 3, 2023
-
Merge branch 'feature/74-blacklist-filtering' into dev
jenniferajiang committedMar 3, 2023 Configuration menu - View commit details
-
Copy full SHA for 6eaaf66 - Browse repository at this point
Copy the full SHA 6eaaf66View commit details
Commits on Mar 10, 2023
-
Merge remote-tracking branch 'origin/feature/filter-debug-logs' into dev
jenniferajiang committedMar 10, 2023 Configuration menu - View commit details
-
Copy full SHA for 1fbfae3 - Browse repository at this point
Copy the full SHA 1fbfae3View commit details
Commits on Apr 21, 2023
-
Pull bug fixes and medcat upgrade: Merge branch 'master' of https://g…
…ithub.com/uclh-criu/miade into dev
jenniferajiang committedApr 21, 2023 Configuration menu - View commit details
-
Copy full SHA for cfb1578 - Browse repository at this point
Copy the full SHA cfb1578View commit details
Commits on Apr 26, 2023
-
Remove Debug Mode - Merge branch 'master' of https://github.com/uclh-…
…criu/miade into dev
jenniferajiang committedApr 26, 2023 Configuration menu - View commit details
-
Copy full SHA for 202dfad - Browse repository at this point
Copy the full SHA 202dfadView commit details
Commits on Apr 27, 2023
-
Merge branch 'master' of https://github.com/uclh-criu/miade into dev
jenniferajiang committedApr 27, 2023 Configuration menu - View commit details
-
Copy full SHA for 508f1d1 - Browse repository at this point
Copy the full SHA 508f1d1View commit details
Commits on Jul 27, 2023
-
Merge branch 'feature/48-allergy-postprocessing' into dev
jenniferajiang committedJul 27, 2023 Configuration menu - View commit details
-
Copy full SHA for 31749ac - Browse repository at this point
Copy the full SHA 31749acView commit details -
Merge branch 'master' of https://github.com/uclh-criu/miade into dev
jenniferajiang committedJul 27, 2023 Configuration menu - View commit details
-
Copy full SHA for 9924b5d - Browse repository at this point
Copy the full SHA 9924b5dView commit details
Commits on Jul 28, 2023
-
Merge branch 'feature/48-allergy-postprocessing' into dev
jenniferajiang committedJul 28, 2023 Configuration menu - View commit details
-
Copy full SHA for a958139 - Browse repository at this point
Copy the full SHA a958139View commit details
Commits on Sep 6, 2023
-
Configuration menu - View commit details
-
Copy full SHA for 1a1e2bc - Browse repository at this point
Copy the full SHA 1a1e2bcView commit details
Commits on Sep 7, 2023
-
Configuration menu - View commit details
-
Copy full SHA for 1747d5f - Browse repository at this point
Copy the full SHA 1747d5fView commit details
Commits on Sep 22, 2023
-
jenniferajiang committed
Sep 22, 2023 Configuration menu - View commit details
-
Copy full SHA for 5362af1 - Browse repository at this point
Copy the full SHA 5362af1View commit details
Commits on Sep 28, 2023
-
Added loading regex config for paragraphs and capping problem concept…
…s to 10
jenniferajiang committedSep 28, 2023 Configuration menu - View commit details
-
Copy full SHA for f9c0109 - Browse repository at this point
Copy the full SHA f9c0109View commit details
Commits on Sep 29, 2023
-
Keep n dash between numbers, update tests
jenniferajiang committedSep 29, 2023 Configuration menu - View commit details
-
Copy full SHA for bc5c973 - Browse repository at this point
Copy the full SHA bc5c973View commit details -
jenniferajiang committed
Sep 29, 2023 Configuration menu - View commit details
-
Copy full SHA for 06adfde - Browse repository at this point
Copy the full SHA 06adfdeView commit details -
Merge branch 'feature/paragraph-chunking' into dev
jenniferajiang committedSep 29, 2023 Configuration menu - View commit details
-
Copy full SHA for c0b39ad - Browse repository at this point
Copy the full SHA c0b39adView commit details
Commits on Oct 2, 2023
-
🐛🔊 Fixed negex bug and added logs for paragrapher
jenniferajiang committedOct 2, 2023 Configuration menu - View commit details
-
Copy full SHA for f0acfec - Browse repository at this point
Copy the full SHA f0acfecView commit details
Commits on Oct 4, 2023
-
🔊 Log message adjustments to make it more readable
jenniferajiang committedOct 4, 2023 Configuration menu - View commit details
-
Copy full SHA for f4708f4 - Browse repository at this point
Copy the full SHA f4708f4View commit details -
🏗️ Changed the way annotators and negex pipelines are configured - ad…
…ded options to disable pipelines
jenniferajiang committedOct 4, 2023 Configuration menu - View commit details
-
Copy full SHA for a5d3f54 - Browse repository at this point
Copy the full SHA a5d3f54View commit details -
🐛 Fixed historic concepts with no conversion are returned as is
jenniferajiang committedOct 4, 2023 Configuration menu - View commit details
-
Copy full SHA for c85172a - Browse repository at this point
Copy the full SHA c85172aView commit details -
✅ forgot to commit updated tests
jenniferajiang committedOct 4, 2023 Configuration menu - View commit details
-
Copy full SHA for 088c810 - Browse repository at this point
Copy the full SHA 088c810View commit details
Commits on Oct 5, 2023
-
Added error handling for config loading
jenniferajiang committedOct 5, 2023 Configuration menu - View commit details
-
Copy full SHA for 7920df1 - Browse repository at this point
Copy the full SHA 7920df1View commit details
Commits on Oct 6, 2023
-
Merge branch 'bug-fix/negex-config-and-improve-logging' into dev
jenniferajiang committedOct 6, 2023 Configuration menu - View commit details
-
Copy full SHA for 50e4aec - Browse repository at this point
Copy the full SHA 50e4aecView commit details -
Merge branch 'master' of https://github.com/uclh-criu/miade into dev
jenniferajiang committedOct 6, 2023 Configuration menu - View commit details
-
Copy full SHA for cd7b5b8 - Browse repository at this point
Copy the full SHA cd7b5b8View commit details
Commits on Oct 10, 2023
-
jenniferajiang committed
Oct 10, 2023 Configuration menu - View commit details
-
Copy full SHA for 72f31cf - Browse repository at this point
Copy the full SHA 72f31cfView commit details -
Merge branch 'hotfix/medcat-patch' into dev
jenniferajiang committedOct 10, 2023 Configuration menu - View commit details
-
Copy full SHA for a370269 - Browse repository at this point
Copy the full SHA a370269View commit details -
Merge branch 'master' of https://github.com/uclh-criu/miade into dev
jenniferajiang committedOct 10, 2023 Configuration menu - View commit details
-
Copy full SHA for 60e02fd - Browse repository at this point
Copy the full SHA 60e02fdView commit details
Commits on Oct 30, 2023
-
Configuration menu - View commit details
-
Copy full SHA for 5c2eb5a - Browse repository at this point
Copy the full SHA 5c2eb5aView commit details -
jenniferajiang committed
Oct 30, 2023 Configuration menu - View commit details
-
Copy full SHA for 8956c18 - Browse repository at this point
Copy the full SHA 8956c18View commit details -
* 🗃️ Update latest lookup table data * ✅ Update tests
Configuration menu - View commit details
-
Copy full SHA for 3109cd0 - Browse repository at this point
Copy the full SHA 3109cd0View commit details -
Configuration menu - View commit details
-
Copy full SHA for 95bbfeb - Browse repository at this point
Copy the full SHA 95bbfebView commit details -
jenniferajiang committed
Oct 30, 2023 Configuration menu - View commit details
-
Copy full SHA for 8bf1bfb - Browse repository at this point
Copy the full SHA 8bf1bfbView commit details -
🐛 Fixed prob list cap bug to return exactly first 10 prob concepts
jenniferajiang committedOct 30, 2023 Configuration menu - View commit details
-
Copy full SHA for ca7dbe0 - Browse repository at this point
Copy the full SHA ca7dbe0View commit details -
jenniferajiang committed
Oct 30, 2023 Configuration menu - View commit details
-
Copy full SHA for dbb165d - Browse repository at this point
Copy the full SHA dbb165dView commit details
Commits on Nov 2, 2023
-
Revert long problems list filtering and add numbering to problems list (
#99) * Revert long problems list capping - it was correct the way it was before * ✨ Add numbering function to ProblemsAnnotator pipeline
Configuration menu - View commit details
-
Copy full SHA for 3bffac2 - Browse repository at this point
Copy the full SHA 3bffac2View commit details
Commits on Nov 6, 2023
-
Streamlit trainer preprocessing (#97)
* Added train csv preprocessing steps * 🐛 Fixed train_csv document loading
Configuration menu - View commit details
-
Copy full SHA for a1b9aa8 - Browse repository at this point
Copy the full SHA a1b9aa8View commit details
Commits on Nov 14, 2023
-
jenniferajiang committed
Nov 14, 2023 Configuration menu - View commit details
-
Copy full SHA for 4f41854 - Browse repository at this point
Copy the full SHA 4f41854View commit details -
Merge branch 'update-blacklist' into dev
jenniferajiang committedNov 14, 2023 Configuration menu - View commit details
-
Copy full SHA for 656b613 - Browse repository at this point
Copy the full SHA 656b613View commit details -
jenniferajiang committed
Nov 14, 2023 Configuration menu - View commit details
-
Copy full SHA for 46e7d86 - Browse repository at this point
Copy the full SHA 46e7d86View commit details -
Merge branch 'dev' of https://github.com/uclh-criu/miade into dev
jenniferajiang committedNov 14, 2023 Configuration menu - View commit details
-
Copy full SHA for 57e2a97 - Browse repository at this point
Copy the full SHA 57e2a97View commit details -
jenniferajiang committed
Nov 14, 2023 Configuration menu - View commit details
-
Copy full SHA for 69eeb57 - Browse repository at this point
Copy the full SHA 69eeb57View commit details
Commits on Nov 15, 2023
-
🗃️ Update problems blacklist v2
jenniferajiang committedNov 15, 2023 Configuration menu - View commit details
-
Copy full SHA for 75c8695 - Browse repository at this point
Copy the full SHA 75c8695View commit details
Commits on Nov 21, 2023
-
Switch to Ruff for formatting and Linting (#104)
* Add ruff cache to gitignore * 👷 Add Ruff to CI * 👷 Set permitted line length to 100 * 🚨 ruff format * 🚨 ruff lint * Re-instate install test * 🐛 Fix import cleanup regressions * 🚨 ruff format
Configuration menu - View commit details
-
Copy full SHA for 4ceab93 - Browse repository at this point
Copy the full SHA 4ceab93View commit details
Commits on Nov 23, 2023
-
Configuration menu - View commit details
-
Copy full SHA for 8ec874f - Browse repository at this point
Copy the full SHA 8ec874fView commit details
Commits on Nov 29, 2023
-
🐛 Fix allergy_type and reaction filtering bug
jenniferajiang committedNov 29, 2023 Configuration menu - View commit details
-
Copy full SHA for ecb9e93 - Browse repository at this point
Copy the full SHA ecb9e93View commit details
Commits on Nov 30, 2023
-
Merge branch 'master' of https://github.com/uclh-criu/miade into bugf…
…ix/allergy-reactions-postprocess
jenniferajiang committedNov 30, 2023 Configuration menu - View commit details
-
Copy full SHA for 6eab644 - Browse repository at this point
Copy the full SHA 6eab644View commit details -
jenniferajiang committed
Nov 30, 2023 Configuration menu - View commit details
-
Copy full SHA for 17cf7ed - Browse repository at this point
Copy the full SHA 17cf7edView commit details -
Merge branch 'bugfix/allergy-reactions-postprocess' into dev
jenniferajiang committedNov 30, 2023 Configuration menu - View commit details
-
Copy full SHA for 1d595e3 - Browse repository at this point
Copy the full SHA 1d595e3View commit details -
jenniferajiang committed
Nov 30, 2023 Configuration menu - View commit details
-
Copy full SHA for a587eb3 - Browse repository at this point
Copy the full SHA a587eb3View commit details -
🚚 Move lookup data outside package (#107)
* 🚚 Move lookup data outside package * 🚚 Add lookup data to lookup_data/ * 🚨 ruff formatting
Configuration menu - View commit details
-
Copy full SHA for 18ac309 - Browse repository at this point
Copy the full SHA 18ac309View commit details
Commits on Dec 18, 2023
-
Merge branch 'master' of https://github.com/uclh-criu/miade into dev
jenniferajiang committedDec 18, 2023 Configuration menu - View commit details
-
Copy full SHA for e074b8f - Browse repository at this point
Copy the full SHA e074b8fView commit details
Commits on Jan 9, 2024
-
Merge branch 'master' of https://github.com/uclh-criu/miade into dev
jenniferajiang committedJan 9, 2024 Configuration menu - View commit details
-
Copy full SHA for 9bb6fda - Browse repository at this point
Copy the full SHA 9bb6fdaView commit details
Commits on Jan 17, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 57728d7 - Browse repository at this point
Copy the full SHA 57728d7View commit details
Commits on Apr 22, 2024
-
Configuration menu - View commit details
-
Copy full SHA for d89ff7f - Browse repository at this point
Copy the full SHA d89ff7fView commit details -
Merge branch 'dev' into improved-paragraph-algorithm
jenniferajiang committedApr 22, 2024 Configuration menu - View commit details
-
Copy full SHA for f750c3b - Browse repository at this point
Copy the full SHA f750c3bView commit details
Commits on Apr 23, 2024
-
Super manual paragraph algorithm wip
jenniferajiang committedApr 23, 2024 Configuration menu - View commit details
-
Copy full SHA for e033cb2 - Browse repository at this point
Copy the full SHA e033cb2View commit details
Commits on Jun 25, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 6799392 - Browse repository at this point
Copy the full SHA 6799392View commit details -
Configuration menu - View commit details
-
Copy full SHA for c1b53b5 - Browse repository at this point
Copy the full SHA c1b53b5View commit details -
Configuration menu - View commit details
-
Copy full SHA for 7099a36 - Browse repository at this point
Copy the full SHA 7099a36View commit details -
Configuration menu - View commit details
-
Copy full SHA for 0b5ebd1 - Browse repository at this point
Copy the full SHA 0b5ebd1View commit details -
Configuration menu - View commit details
-
Copy full SHA for 0cc23b9 - Browse repository at this point
Copy the full SHA 0cc23b9View commit details -
Configuration menu - View commit details
-
Copy full SHA for eb7ffe3 - Browse repository at this point
Copy the full SHA eb7ffe3View commit details -
Configuration menu - View commit details
-
Copy full SHA for d37d5dd - Browse repository at this point
Copy the full SHA d37d5ddView commit details -
Configuration menu - View commit details
-
Copy full SHA for 55fd2e9 - Browse repository at this point
Copy the full SHA 55fd2e9View commit details -
Configuration menu - View commit details
-
Copy full SHA for 627fec6 - Browse repository at this point
Copy the full SHA 627fec6View commit details -
Configuration menu - View commit details
-
Copy full SHA for f954510 - Browse repository at this point
Copy the full SHA f954510View commit details
Commits on Jul 24, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 91ef392 - Browse repository at this point
Copy the full SHA 91ef392View commit details -
Configuration menu - View commit details
-
Copy full SHA for d454701 - Browse repository at this point
Copy the full SHA d454701View commit details
Commits on Jul 30, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 36be84e - Browse repository at this point
Copy the full SHA 36be84eView commit details -
Configuration menu - View commit details
-
Copy full SHA for 2010212 - Browse repository at this point
Copy the full SHA 2010212View commit details -
Configuration menu - View commit details
-
Copy full SHA for 4189128 - Browse repository at this point
Copy the full SHA 4189128View commit details -
Configuration menu - View commit details
-
Copy full SHA for b340f74 - Browse repository at this point
Copy the full SHA b340f74View commit details -
Configuration menu - View commit details
-
Copy full SHA for 971c760 - Browse repository at this point
Copy the full SHA 971c760View commit details -
Configuration menu - View commit details
-
Copy full SHA for b638036 - Browse repository at this point
Copy the full SHA b638036View commit details
Commits on Jul 31, 2024
-
Configuration menu - View commit details
-
Copy full SHA for a57832e - Browse repository at this point
Copy the full SHA a57832eView commit details -
Add list_cleaner to annotator pipelines and make run_pipeline method …
…an abstract method
Configuration menu - View commit details
-
Copy full SHA for dd02a06 - Browse repository at this point
Copy the full SHA dd02a06View commit details -
Configuration menu - View commit details
-
Copy full SHA for 745ad15 - Browse repository at this point
Copy the full SHA 745ad15View commit details -
Configuration menu - View commit details
-
Copy full SHA for 1ca914e - Browse repository at this point
Copy the full SHA 1ca914eView commit details
Commits on Aug 1, 2024
-
Configuration menu - View commit details
-
Copy full SHA for 31f976d - Browse repository at this point
Copy the full SHA 31f976dView commit details