neherlab / covid19_scenarios Star 1.4k Code Issues Pull requests Discussions Models of COVID-19 outbreak trajectories and hospital demand open-source science data opensource research simulation model population hospital modelling outbreak ventilator ncov coronavirus covid-19 covid sars-cov-2 neherlab Updated Feb 15, 2022 JavaScript
nextstrain / nextclade Star 219 Code Issues Pull requests Discussions Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement science research virus sequencing next-generation-sequencing dna rna influenza sequences strain nextstrain ncov coronavirus covid-19 covid covid19 sars-cov-2 neherlab clades clade Updated Oct 18, 2024 Rust
neherlab / covid19_scenarios_data Star 41 Code Issues Pull requests Data preprocessing scripts and preprocessed data storage for COVID-19 Scenarios project open-source science data opensource research simulation model population hospital modelling scenarios outbreak ventilator ncov coronavirus covid-19 covid sars-cov-2 neherlab Updated Apr 1, 2020 Python