Deploy #1240
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| name: Deploy | |
| on: | |
| push: | |
| paths-ignore: | |
| - "README.md" | |
| - "**/docs/**" | |
| - ".github/workflows/docs.yml" | |
| pull_request: | |
| branches: | |
| - master | |
| schedule: | |
| - cron: "0 11 * * *" | |
| jobs: | |
| publish-pypi: | |
| name: Publish to PyPi | |
| if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags') | |
| runs-on: ubuntu-latest | |
| permissions: | |
| # IMPORTANT: this permission is mandatory for trusted publishing | |
| id-token: write | |
| steps: | |
| - name: Checkout source | |
| uses: actions/checkout@v4 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.9 | |
| - name: Build package | |
| run: | | |
| pip install wheel setuptools -U | |
| python setup.py sdist | |
| - name: Publish | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| skip-existing: true | |
| test-publish-pypi: | |
| name: Build & verify PyPi | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.9 | |
| - name: Install twine | |
| run: | | |
| python -m pip install twine | |
| - name: Build package | |
| run: | | |
| pip install wheel setuptools -U | |
| python setup.py sdist | |
| - name: List result | |
| run: | | |
| ls -lh dist | |
| - name: Check long_description | |
| run: | | |
| python -m twine check dist/* | |
| build-conda: | |
| name: Build in Conda | |
| if: startsWith(github.event.ref, 'refs/tags') == false | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest, macos-12] | |
| python-version: [3.9] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| # - name: Set up Python | |
| # uses: actions/setup-python@v5 | |
| # with: | |
| # python-version: ${{ matrix.python-version }} | |
| # - name: Cache conda | |
| # uses: actions/cache@v4 | |
| # env: | |
| # # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| # CACHE_NUMBER: 0 | |
| # with: | |
| # path: ~/conda_pkgs_dir | |
| # key: conda-${{ matrix.os }}-python-${{ matrix.python-version }}-${{ hashFiles('ci/environment.yml') }} | |
| - name: Add conda ${{ matrix.python-version }} to system path | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: "test_env" | |
| auto-activate-base: false | |
| architecture: "x64" | |
| miniforge-variant: Mambaforge | |
| #miniforge-version: latest | |
| python-version: ${{ matrix.python-version }} | |
| auto-update-conda: true | |
| environment-file: ci/environment.yml | |
| use-only-tar-bz2: true | |
| channel-priority: true | |
| channels: conda-forge, xspecmodels, threeml | |
| - name: Init Env | |
| shell: bash -l {0} | |
| run: | | |
| # Make sure we fail in case of error | |
| if [[ ${{matrix.os}} == ubuntu-latest ]]; | |
| then | |
| miniconda_os=Linux | |
| compilers="gcc_linux-64 gxx_linux-64 gfortran_linux-64" | |
| else # osx | |
| miniconda_os=MacOSX | |
| compilers="clang_osx-64 clangxx_osx-64 gfortran_osx-64" | |
| # On macOS we also need the conda libx11 libraries used to build xspec | |
| # We also need to pin down ncurses, for now only on macos. | |
| xorg="xorg-libx11" | |
| fi | |
| export PKG_VERSION=$(python -c "import versioneer;print(versioneer.get_version())") | |
| echo "PKG_VERSION=$PKG_VERSION" >> $GITHUB_ENV | |
| echo "HOME= ${HOME}" | |
| echo "Conda installation path ${CONDA}" | |
| echo "Building ${PKG_VERSION}" | |
| #echo "Python version: ${{matrix.python-version}}" | |
| conda install codecov pytest-cov | |
| - name: Conda list | |
| shell: bash -l {0} | |
| run: | | |
| conda list | |
| - name: Build the Distribution | |
| shell: bash -l {0} | |
| run: | | |
| # Build package | |
| #conda install conda-build -n base | |
| mamba install -c conda-forge boa | |
| #conda build --python=${{matrix.python-version}} conda-dist/recipe | |
| conda mambabuild --python=${{matrix.python-version}} conda-dist/recipe | |
| #conda install --use-local astromodels | |
| conda install -c ${CONDA}/envs/test_env/conda-bld/ astromodels | |
| - name: Test conda build | |
| shell: bash -l {0} | |
| run: | | |
| cd astromodels/tests | |
| echo "======> importing XSPEC..." | |
| python -c "import astromodels.xspec" | |
| python -m pytest -vv --cov=astromodels --cov-report=xml | |
| env: | |
| OMP_NUM_THREADS: 1 | |
| MKL_NUM_THREADS: 1 | |
| NUMEXPR_NUM_THREADS: 1 | |
| MPLBACKEND: "Agg" | |
| publish-conda: | |
| name: Publish to Conda | |
| if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags') | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: [3.9] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Cache conda | |
| uses: actions/cache@v4 | |
| env: | |
| # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| with: | |
| path: ~/conda_pkgs_dir | |
| key: conda-${{ matrix.os }}-python-${{ matrix.python-version }}-${{ hashFiles('ci/environment.yml') }} | |
| - name: Add conda ${{ matrix.python-version }} to system path | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: "test_env" | |
| auto-activate-base: false | |
| architecture: "x64" | |
| miniforge-variant: Mambaforge | |
| #miniforge-version: latest | |
| python-version: ${{ matrix.python-version }} | |
| auto-update-conda: true | |
| environment-file: ci/environment.yml | |
| use-only-tar-bz2: true | |
| channel-priority: true | |
| channels: conda-forge, xspecmodels, threeml | |
| - name: Init Env | |
| shell: bash -l {0} | |
| run: | | |
| # Make sure we fail in case of error | |
| if [[ ${{matrix.os}} == ubuntu-latest ]]; | |
| then | |
| miniconda_os=Linux | |
| compilers="gcc_linux-64 gxx_linux-64 gfortran_linux-64" | |
| else # osx | |
| miniconda_os=MacOSX | |
| compilers="clang_osx-64 clangxx_osx-64 gfortran_osx-64" | |
| # On macOS we also need the conda libx11 libraries used to build xspec | |
| # We also need to pin down ncurses, for now only on macos. | |
| xorg="xorg-libx11" | |
| fi | |
| export PKG_VERSION=$(python -c "import versioneer;print(versioneer.get_version())") | |
| echo "PKG_VERSION=$PKG_VERSION" >> $GITHUB_ENV | |
| echo "HOME= ${HOME}" | |
| echo "Conda installation path ${CONDA}" | |
| echo "Building ${PKG_VERSION}" | |
| - name: Build the Distribution | |
| shell: bash -l {0} | |
| run: | | |
| # Build package | |
| #conda install conda-build -n base | |
| mamba install -c conda-forge boa | |
| #conda build --python=${{matrix.python-version}} conda-dist/recipe | |
| conda mambabuild --python=${{matrix.python-version}} conda-dist/recipe | |
| #conda install --use-local astromodels | |
| conda install -c ${CONDA}/envs/test_env/conda-bld/ astromodels | |
| - name: Publish to Conda | |
| shell: bash -l {0} | |
| run: | | |
| conda install -c conda-forge anaconda-client | |
| echo "Uploading ${{matrix.os}} IsDev: ${ISDEV} " | |
| if [[ "${ISDEV}" == "true" ]]; then | |
| LABEL="--label dev" | |
| fi | |
| if [[ ${{matrix.os}} == ubuntu-latest ]]; | |
| then | |
| anaconda -v --show-traceback -t $UPLOAD_TOKEN upload -u threeml ${CONDA}/envs/test_env/conda-bld/linux-64/*.tar.bz2 --force $LABEL | |
| else | |
| anaconda -v --show-traceback -t $UPLOAD_TOKEN upload -u threeml ${CONDA}/envs/test_env/conda-bld/osx-64/*.tar.bz2 --force $LABEL | |
| fi | |
| env: | |
| UPLOAD_TOKEN: ${{secrets.CONDA_UPLOAD_TOKEN}} | |
| CURRENT_OS: ${{matrix.os}} | |
| ISDEV: ${{contains(github.ref, 'dev')}} |