version 3.3.5 #18
Workflow file for this run
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| name: "Deploy to CGC" | |
| on: | |
| release: | |
| types: [released, edited] | |
| jobs: | |
| cgc: | |
| runs-on: ubuntu-20.04 | |
| name: "Deploy" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set the docker tag from Repo Tag | |
| id: set_dockertag | |
| env: | |
| IMAGE: cgc-images.sbgenomics.com/stjude/rnaindel | |
| VERSION_TAG: ${{ github.event.release.tag_name }} | |
| run: | | |
| jq --arg image "${{ env.IMAGE }}:${{ env.VERSION_TAG }}" '(.requirements | .[] | select(.class == ("DockerRequirement")) | .dockerPull) |= $image' cgc/rnaindel.cwl > cgc/rnaindel.cwl.new | |
| mv cgc/rnaindel.cwl.new cgc/rnaindel.cwl | |
| cat cgc/rnaindel.cwl | |
| - id: cgcdeploy | |
| uses: stjudecloud/[email protected] | |
| with: | |
| file_location: "cgc/rnaindel.cwl" | |
| shortid: "stjude/rnaindel/rnaindel" | |
| env: | |
| CGC_TOKEN: ${{ secrets.CGC_TOKEN }} | |