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Releases: snakemake/snakemake-hpc-teaching-material

v1.3.1

25 Sep 06:20
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1.3.1 (2024-09-24)

Bug Fixes

  • re-shuffled slide deck to better introduce the coding scenario and data retrival (#146) (e8a4af8)
  • various little details (#148) (058e251)

v1.3.0

22 Sep 18:26
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1.3.0 (2024-09-21)

Features

v1.2.3

11 Sep 07:44
50cef0f
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1.2.3 (2024-09-11)

Bug Fixes

v1.2.2

10 Sep 19:11
915b3d4
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1.2.2 (2024-09-10)

Bug Fixes

v1.2.1

24 Aug 18:04
eb0d14a
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1.2.1 (2024-08-24)

Bug Fixes

v1.2.0

24 Aug 17:10
a596cdb
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1.2.0 (2024-08-23)

Features

Bug Fixes

v1.1.1

23 Aug 13:15
790fa8b
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1.1.1 (2024-08-23)

Bug Fixes

  • added Martin's name - was missing (#74) (6d5d3e1)

v1.1.0

10 Jun 20:24
3bdbdaf
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1.1.0 (2024-06-10)

Features

  • adding testing, mastodon badge and license badge (#87) (c505e10)

Bug Fixes

v1.0.1

15 May 19:14
7a2439c
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1.0.1 (2024-05-15)

Bug Fixes

v1.0.0

15 May 17:06
798f362
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1.0.0 (2024-05-15)

Features

  • 09 with config read groups (b5a9ebe)
  • 10 with log directives (ab0f505)
  • adapted configuration template strings to the new scheme (b8f6a35)
  • adapted github workflow accordingly (522856e)
  • added / adjusted condarc for barnard (e83f939)
  • added an enslide figure (de9cdd3)
  • added cluster account and partition to config file (f853fdb)
  • added collab image (12c7692)
  • added combi for users and creators (59b6453)
  • added config file to tutorial folder (cad3c22)
  • added configuration for github (0605d6c)
  • added dummy config template in yaml format (3b409ee)
  • added edition strings to configurations (784d49a)
  • added first version of a render script reading default from a yaml file (77281df)
  • added flavour icon image (48ba3ce)
  • added generic config workflow profile (50207fa)
  • added image to illustrate workflow deployment (d51f313)
  • added new 'report' image (a1cd8d2)
  • added slide about course material feedback (3a9e72a)
  • added standard pdflatex flags (9bf7d0e)
  • added task description to cloze text (bd9cc20)
  • Adding slides explaining the setup, usage and creation of snakemake wrappers. (f934787), closes #44
  • Adding slides explaining the setup, usage and creation of snakemake wrappers. (1462a6c), closes #44
  • adding the need for conventional commits to our CI (263887c)
  • benchmarking slide set with graphical section slide and about slide (35769b5)
  • cluster name and distro configurable (55e2309)
  • completing last slide (b40b80d)
  • configurable basic layout (#90) (425cf14)
  • copy script sample for ZIH Dresden (db52e27)
  • customizable themes (#92) (e320a03)
  • describing purpose of input functions and asking for config file benefits (d541e34)
  • description of protected funtion (3c19fe2)
  • dresden cluster barnard config (05b6a95)
  • example for new minitoc section start slide (a80c0bc)
  • explaining wildcards.sample (5447b5e)
  • explicit mention of 06_Snakefile in end of Python slide deck (42e4e9a)
  • finished graphical minitoc for Contributing section (8f62989)
  • formatting (adc99ee)
  • graphical minitoc for contribution section (a79b00a)
  • graphical minitor for 'a first workflow' (246ffbc)
  • graphical minitor for contribution section (265b9ae)
  • graphical minitor for Decoration slide set (269dbe0)
  • graphical slide for Python in Snakemake minitoc (ae07bec)
  • hello world example for cluster barnard (69b449f)
  • introduced configurable edition (59b4958)
  • introduced get sample data slide in users (bca0c55)
  • introduced slides about actual deployment in 'Selecting_Workflow' slide set (aaa729a)
  • made all cluster parameters configurable (9b52524)
  • mentioning 'snakedeploy' in 'Deployment' slide (e55f012)
  • new benchmarking file set (c51c7cf)
  • new benchmarking file set in Snakemake_HPC_Creators.tex master doc (8cb1312)
  • new chapter 'About Snakemake' correctly placed (4f879d4)
  • new config for ZIH - not ready (50c5f99)
  • new mini toc slide (aa86bcd)
  • new minitoc for selecting workflows chapters (609ba07)
  • new section (3e58945)
  • new slide about conda flavours (9e84721)
  • new slide in Python section - asking for plot output to be a target, too. (894540f)
  • note on 09 ([69d6731](https://github.com/snakemake/snakemake...
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