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johnkerl committed Sep 16, 2024
1 parent ddaac5e commit 3fd71a6
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Showing 2 changed files with 1 addition and 12 deletions.
8 changes: 1 addition & 7 deletions apis/python/setup.py
Original file line number Diff line number Diff line change
Expand Up @@ -332,13 +332,7 @@ def run(self):
"numba>=0.58.0",
"numpy<2.0",
"pandas",
# TODO: once we no longer support Python 3.7, remove this and pin to pyarrow >= 14.0.1
# https://github.com/single-cell-data/TileDB-SOMA/issues/1926
"pyarrow_hotfix",
# MacOS issue with import pyarrow before import tiledb at >= 13.0:
# https://github.com/single-cell-data/TileDB-SOMA/issues/1926#issuecomment-1834695149
"pyarrow>=9.0.0,<13.0.0; platform_system=='Darwin'",
"pyarrow>=9.0.0; platform_system!='Darwin'",
"pyarrow",
"scanpy>=1.9.2",
"scipy",
# Note: the somacore version is in .pre-commit-config.yaml too
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5 changes: 0 additions & 5 deletions apis/python/src/tiledbsoma/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -150,11 +150,6 @@ def _new_shape_feature_flag_enabled() -> bool:
from somacore import AxisColumnNames, AxisQuery, ExperimentAxisQuery
from somacore.options import ResultOrder

# TODO: once we no longer support Python 3.7, remove this and pin to pyarrow >= 14.0.1
# https://github.com/single-cell-data/TileDB-SOMA/issues/1926
# ruff: noqa
import pyarrow_hotfix

from ._collection import Collection
from ._constants import SOMA_JOINID
from ._dataframe import DataFrame
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