Grid-Cells

• neural_networks folder: Train RNN and LSTM neural net on a path integration task and get the ratemaps of hidden neurons

• tda folder: Notebooks to test and compare TDA libraries on the ratemaps

• utils folder: Utility functions for maniupalting the data

• gridness folder: evaluate gridness, review of methods used in literature and experiments with TDA tecniques

• clustering folder: apply TDA to cluster ratemaps based on topological features

  • Distance matrix comparison: comparison of distance matrices between persistence diagrams, based on diffent metrics
  • Clustering visualization: visualization of clustering based on hierarchical techniques.