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(feat): [WIP] support physical quantities via Pint #1481

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Add test for reading/writing Pint quantities

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(feat): [WIP] support physical quantities via Pint #1481

Add test for reading/writing Pint quantities
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Azure Pipelines / scverse.anndata failed Apr 24, 2024 in 15m 39s

Build #20240424.3 had test failures

4 errors / 2 warnings

Details

Tests

  • Failed: 4 (0.02%)
  • Passed: 17,083 (85.03%)
  • Other: 3,003 (14.95%)
  • Total: 20,090

Annotations

Check failure on line 350 in Build log

See this annotation in the file changed.

@azure-pipelines azure-pipelines / scverse.anndata

Build log #L350 

Bash exited with code '1'.

Check failure on line 349 in Build log

See this annotation in the file changed.

@azure-pipelines azure-pipelines / scverse.anndata

Build log #L349 

Bash exited with code '1'.

Check failure on line 397 in Build log

See this annotation in the file changed.

@azure-pipelines azure-pipelines / scverse.anndata

Build log #L397 

Bash exited with code '1'.

Check failure on line 354 in Build log

See this annotation in the file changed.

@azure-pipelines azure-pipelines / scverse.anndata

Build log #L354 

Bash exited with code '1'.

Check failure on line 1 in test_readwrite_units

See this annotation in the file changed.

@azure-pipelines azure-pipelines / scverse.anndata

test_readwrite_units 

failed on setup with "file /home/vsts/work/1/s/src/anndata/tests/test_readwrite.py, line 826
  def test_readwrite_units(read, write, name, tmp_path):
E       fixture 'read' not found
>       available fixtures: _doctest_env, _suppress_env_for_doctests, anyio_backend, anyio_backend_name, anyio_backend_options, backing_h5ad, cache, capfd, capfdbinary, caplog, capsys, capsysbinary, class_mocker, cov, dataset_kwargs, diskfmt, diskfmt2, doctest_namespace, dtype, mocker, module_mocker, monkeypatch, no_cover, package_mocker, pytestconfig, record_property, record_testsuite_property, record_xml_attribute, recwarn, rw, session_mocker, subset_func, testrun_uid, tmp_path, tmp_path_factory, tmpdir, tmpdir_factory, worker_id
>       use 'pytest --fixtures [testpath]' for help on them.

/home/vsts/work/1/s/src/anndata/tests/test_readwrite.py:826"
Raw output 
file /home/vsts/work/1/s/src/anndata/tests/test_readwrite.py, line 826
  def test_readwrite_units(read, write, name, tmp_path):
E       fixture 'read' not found
>       available fixtures: _doctest_env, _suppress_env_for_doctests, anyio_backend, anyio_backend_name, anyio_backend_options, backing_h5ad, cache, capfd, capfdbinary, caplog, capsys, capsysbinary, class_mocker, cov, dataset_kwargs, diskfmt, diskfmt2, doctest_namespace, dtype, mocker, module_mocker, monkeypatch, no_cover, package_mocker, pytestconfig, record_property, record_testsuite_property, record_xml_attribute, recwarn, rw, session_mocker, subset_func, testrun_uid, tmp_path, tmp_path_factory, tmpdir, tmpdir_factory, worker_id
>       use 'pytest --fixtures [testpath]' for help on them.

/home/vsts/work/1/s/src/anndata/tests/test_readwrite.py:826

Check failure on line 1 in test_readwrite_units

See this annotation in the file changed.

@azure-pipelines azure-pipelines / scverse.anndata

test_readwrite_units 

failed on setup with "file /home/vsts/work/1/s/src/anndata/tests/test_readwrite.py, line 826
  def test_readwrite_units(read, write, name, tmp_path):
E       fixture 'read' not found
>       available fixtures: _doctest_env, _suppress_env_for_doctests, anyio_backend, anyio_backend_name, anyio_backend_options, backing_h5ad, cache, capfd, capfdbinary, caplog, capsys, capsysbinary, class_mocker, cov, dataset_kwargs, diskfmt, diskfmt2, doctest_namespace, dtype, mocker, module_mocker, monkeypatch, no_cover, package_mocker, pytestconfig, record_property, record_testsuite_property, record_xml_attribute, recwarn, rw, session_mocker, subset_func, testrun_uid, tmp_path, tmp_path_factory, tmpdir, tmpdir_factory, worker_id
>       use 'pytest --fixtures [testpath]' for help on them.

/home/vsts/work/1/s/src/anndata/tests/test_readwrite.py:826"
Raw output 
file /home/vsts/work/1/s/src/anndata/tests/test_readwrite.py, line 826
  def test_readwrite_units(read, write, name, tmp_path):
E       fixture 'read' not found
>       available fixtures: _doctest_env, _suppress_env_for_doctests, anyio_backend, anyio_backend_name, anyio_backend_options, backing_h5ad, cache, capfd, capfdbinary, caplog, capsys, capsysbinary, class_mocker, cov, dataset_kwargs, diskfmt, diskfmt2, doctest_namespace, dtype, mocker, module_mocker, monkeypatch, no_cover, package_mocker, pytestconfig, record_property, record_testsuite_property, record_xml_attribute, recwarn, rw, session_mocker, subset_func, testrun_uid, tmp_path, tmp_path_factory, tmpdir, tmpdir_factory, worker_id
>       use 'pytest --fixtures [testpath]' for help on them.

/home/vsts/work/1/s/src/anndata/tests/test_readwrite.py:826

Check failure on line 1 in test_readwrite_units

See this annotation in the file changed.

@azure-pipelines azure-pipelines / scverse.anndata

test_readwrite_units 

failed on setup with "file /home/vsts/work/1/s/src/anndata/tests/test_readwrite.py, line 826
  def test_readwrite_units(read, write, name, tmp_path):
E       fixture 'read' not found
>       available fixtures: _doctest_env, _suppress_env_for_doctests, anyio_backend, anyio_backend_name, anyio_backend_options, backing_h5ad, cache, capfd, capfdbinary, caplog, capsys, capsysbinary, class_mocker, cov, dataset_kwargs, diskfmt, diskfmt2, doctest_namespace, dtype, mocker, module_mocker, monkeypatch, no_cover, package_mocker, pytestconfig, record_property, record_testsuite_property, record_xml_attribute, recwarn, rw, session_mocker, subset_func, testrun_uid, tmp_path, tmp_path_factory, tmpdir, tmpdir_factory, worker_id
>       use 'pytest --fixtures [testpath]' for help on them.

/home/vsts/work/1/s/src/anndata/tests/test_readwrite.py:826"
Raw output 
file /home/vsts/work/1/s/src/anndata/tests/test_readwrite.py, line 826
  def test_readwrite_units(read, write, name, tmp_path):
E       fixture 'read' not found
>       available fixtures: _doctest_env, _suppress_env_for_doctests, anyio_backend, anyio_backend_name, anyio_backend_options, backing_h5ad, cache, capfd, capfdbinary, caplog, capsys, capsysbinary, class_mocker, cov, dataset_kwargs, diskfmt, diskfmt2, doctest_namespace, dtype, mocker, module_mocker, monkeypatch, no_cover, package_mocker, pytestconfig, record_property, record_testsuite_property, record_xml_attribute, recwarn, rw, session_mocker, subset_func, testrun_uid, tmp_path, tmp_path_factory, tmpdir, tmpdir_factory, worker_id
>       use 'pytest --fixtures [testpath]' for help on them.

/home/vsts/work/1/s/src/anndata/tests/test_readwrite.py:826

Check failure on line 1 in test_readwrite_units

See this annotation in the file changed.

@azure-pipelines azure-pipelines / scverse.anndata

test_readwrite_units 

failed on setup with "file /home/vsts/work/1/s/src/anndata/tests/test_readwrite.py, line 826
  def test_readwrite_units(read, write, name, tmp_path):
E       fixture 'read' not found
>       available fixtures: _doctest_env, _suppress_env_for_doctests, anyio_backend, anyio_backend_name, anyio_backend_options, backing_h5ad, cache, capfd, capfdbinary, caplog, capsys, capsysbinary, class_mocker, cov, dataset_kwargs, diskfmt, diskfmt2, doctest_namespace, dtype, mocker, module_mocker, monkeypatch, no_cover, package_mocker, pytestconfig, record_property, record_testsuite_property, record_xml_attribute, recwarn, rw, session_mocker, subset_func, testrun_uid, tmp_path, tmp_path_factory, tmpdir, tmpdir_factory, worker_id
>       use 'pytest --fixtures [testpath]' for help on them.

/home/vsts/work/1/s/src/anndata/tests/test_readwrite.py:826"
Raw output 
file /home/vsts/work/1/s/src/anndata/tests/test_readwrite.py, line 826
  def test_readwrite_units(read, write, name, tmp_path):
E       fixture 'read' not found
>       available fixtures: _doctest_env, _suppress_env_for_doctests, anyio_backend, anyio_backend_name, anyio_backend_options, backing_h5ad, cache, capfd, capfdbinary, caplog, capsys, capsysbinary, class_mocker, cov, dataset_kwargs, diskfmt, diskfmt2, doctest_namespace, dtype, mocker, module_mocker, monkeypatch, no_cover, package_mocker, pytestconfig, record_property, record_testsuite_property, record_xml_attribute, recwarn, rw, session_mocker, subset_func, testrun_uid, tmp_path, tmp_path_factory, tmpdir, tmpdir_factory, worker_id
>       use 'pytest --fixtures [testpath]' for help on them.

/home/vsts/work/1/s/src/anndata/tests/test_readwrite.py:826
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