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fix: pandas and double nested vectors issue 885 (#912)
* fix: pandas and double nested vectors issue 885 * style: pre-commit fixes * Rename test file to match PR number. * Fix ROOT import. * Fix order of operations. * Fix order of operations.2 * style: pre-commit fixes * Change the logic in pandas finalize. * style: pre-commit fixes --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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tests/test_0912-fix-pandas-and-double-nested-vectors-issue-885.py
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# BSD 3-Clause License; see https://github.com/scikit-hep/uproot5/blob/main/LICENSE | ||
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import uproot | ||
import pytest | ||
import skhep_testdata, os | ||
import numpy as np | ||
import awkward as ak | ||
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ROOT = pytest.importorskip("ROOT") | ||
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def test_pandas_and_double_nested_vectors_issue_885(tmp_path): | ||
filename = os.path.join( | ||
tmp_path, "uproot_test_pandas_and_double_nested_vectors.root" | ||
) | ||
f = ROOT.TFile(filename, "recreate") | ||
t = ROOT.TTree("mytree", "example tree") | ||
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vec1 = ROOT.std.vector("double")() | ||
vec2 = ROOT.std.vector("double")() | ||
vec_vec = ROOT.std.vector(ROOT.std.vector("double"))() | ||
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for i in range(3): | ||
vec1.push_back(i) | ||
for i in range(5): | ||
vec2.push_back(i) | ||
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vec_vec.push_back(vec1) | ||
vec_vec.push_back(vec2) | ||
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a = np.array([1, 2, 3, 4], dtype=np.uint32) | ||
avec = ROOT.std.vector("unsigned int")(a) | ||
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b = np.array([[[0, 1, 3], [4, 5, 6], [7, 8, 9]]], dtype=np.uint32) | ||
bvec = ROOT.std.vector("unsigned int")(b) | ||
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t.Branch("2Dvector", vec_vec) | ||
t.Branch("1Dvector", avec) | ||
t.Branch("othervector", bvec) | ||
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nentries = 25 | ||
for i in range(nentries): | ||
t.Fill() | ||
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f.Write() | ||
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with uproot.open(filename)["mytree"] as fs: | ||
u = fs.arrays(["2Dvector", "1Dvector", "othervector"], library="pd") | ||
assert isinstance(u["2Dvector"][0], ak.highlevel.Array) | ||
assert isinstance(u["1Dvector"][0], ak.highlevel.Array) | ||
assert isinstance(u["othervector"][0], ak.highlevel.Array) | ||
assert ak.to_list(u["2Dvector"][0]) == [[0, 1, 2], [0, 1, 2, 3, 4]] | ||
assert ak.to_list(u["1Dvector"][0]) == [1, 2, 3, 4] | ||
assert ak.to_list(u["othervector"][0]) == [0, 1, 3, 4, 5, 6, 7, 8, 9] |