Merge pull request #83 from rabix/bugfix/wrabbit_exec_mode

Update wrabbit
rabix · May 21, 2024 · 09e8e35 · 09e8e35
2 parents a47bd01 + 8994c25
commit 09e8e35
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Showing 4 changed files with 4 additions and 3 deletions.
diff --git a/MANIFEST.in b/MANIFEST.in
@@ -1 +0,0 @@
-include sbpack/noncwl/js_templates/*.js

diff --git a/requirements.txt b/requirements.txt
@@ -1,6 +1,6 @@
 ruamel.yaml >= 0.16
 sevenbridges-python >= 2.0
 nf-core==2.1
-wrabbit==0.1.1
+wrabbit==0.1.2
 cwlformat
 packaging
diff --git a/sbpack/noncwl/nextflow.py b/sbpack/noncwl/nextflow.py
@@ -55,6 +55,7 @@ def nf_schema_build(self):
  logging.getLogger("nf_core.schema").setLevel("CRITICAL")
 
  self.nf_ps.schema_filename = nf_schema_path
+ # if not os.path.exists(nf_schema_path):
  self.nf_ps.build_schema(
  pipeline_dir=self.workflow_path,
  no_prompts=True,
@@ -248,6 +249,7 @@ def main():
  nf_wrapper.sb_wrapper.load(schema)
  else:
  # build schema
+ # Do this only if the nextflow_schema.json is missing
  nf_wrapper.nf_schema_build()
 
  # Create app

diff --git a/sbpack/version.py b/sbpack/version.py
@@ -1 +1 @@
-__version__ = "2024.5.7rc1"
+__version__ = "2024.5.21rc1"