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test DBMS support with Posit Pro Drivers (#819)
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on: | ||
push: | ||
branches: | ||
- master | ||
- main | ||
pull_request: | ||
branches: | ||
- master | ||
- main | ||
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name: DBs + Posit Pro Drivers (Linux) | ||
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jobs: | ||
database: | ||
runs-on: ubuntu-latest | ||
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services: | ||
oracle: | ||
image: gvenzl/oracle-xe:21.3.0 | ||
ports: | ||
- 1521:1521 | ||
env: | ||
ORACLE_RANDOM_PASSWORD: true | ||
ORACLE_DATABASE: test | ||
APP_USER: RodbcR | ||
APP_USER_PASSWORD: Password12 | ||
options: >- | ||
--health-cmd healthcheck.sh | ||
--health-interval 10s | ||
--health-timeout 5s | ||
--health-retries 10 | ||
postgres: | ||
image: postgres | ||
ports: | ||
- 5432:5432 | ||
env: | ||
POSTGRES_USER: postgres | ||
POSTGRES_PASSWORD: password | ||
POSTGRES_DB: test | ||
options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5 | ||
sqlserver: | ||
image: mcr.microsoft.com/mssql/server:2017-latest-ubuntu | ||
ports: | ||
- 1433:1433 | ||
env: | ||
ACCEPT_EULA: Y | ||
SA_PASSWORD: Password12 | ||
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env: | ||
CRAN: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest" | ||
ODBCSYSINI: ${{ github.workspace }}/.github/odbc | ||
TNS_ADMIN: ${{ github.workspace }}/.github/odbc | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
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steps: | ||
- uses: actions/checkout@v3 | ||
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- uses: r-lib/actions/setup-r@v2 | ||
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- name: Install MySQL Driver | ||
run: | | ||
sudo systemctl start mysql.service | ||
mysql -uroot -h127.0.0.1 -proot -e 'CREATE DATABASE `test`;' | ||
echo "ODBC_CS_MYSQL=dsn=ProMySQL" >> $GITHUB_ENV | ||
mkdir -p $ODBCSYSINI/pro_drivers/mysql | ||
touch $ODBCSYSINI/pro_drivers/mysql.tar.gz | ||
curl ${{ secrets.PRO_DRIVER_MYSQL }} --output $ODBCSYSINI/pro_drivers/mysql.tar.gz | ||
tar -xvzf $ODBCSYSINI/pro_drivers/mysql.tar.gz -C $ODBCSYSINI/pro_drivers/mysql | ||
- name: Install SQL Server Driver | ||
run: | | ||
echo "ODBC_CS_SQLSERVER=dsn=ProMicrosoftSQLServer;UID=SA;PWD=Password12" >> $GITHUB_ENV | ||
mkdir -p $ODBCSYSINI/pro_drivers/sql_server | ||
touch $ODBCSYSINI/pro_drivers/sql_server.tar.gz | ||
curl ${{ secrets.PRO_DRIVER_SQL_SERVER }} --output $ODBCSYSINI/pro_drivers/sql_server.tar.gz | ||
tar -xvzf $ODBCSYSINI/pro_drivers/sql_server.tar.gz -C $ODBCSYSINI/pro_drivers/sql_server | ||
- name: Install Oracle Driver | ||
run: | | ||
echo "ODBC_CS_ORACLE=dsn=ProOracle;UID=RodbcR;PWD=Password12;DBQ=test" >> $GITHUB_ENV | ||
.github/odbc/install-oracle-driver.sh | ||
echo "LD_LIBRARY_PATH=/opt/oracle/instantclient_21_12:$LD_LIBRARY_PATH" >> $GITHUB_ENV | ||
mkdir -p $ODBCSYSINI/pro_drivers/oracle | ||
touch $ODBCSYSINI/pro_drivers/oracle.tar.gz | ||
curl ${{ secrets.PRO_DRIVER_ORACLE }} --output $ODBCSYSINI/pro_drivers/oracle.tar.gz | ||
tar -xvzf $ODBCSYSINI/pro_drivers/oracle.tar.gz -C $ODBCSYSINI/pro_drivers/oracle | ||
- name: Install PostgreSQL Driver | ||
run: | | ||
echo "ODBC_CS_POSTGRES=dsn=ProPostgreSQL" >> $GITHUB_ENV | ||
mkdir -p $ODBCSYSINI/pro_drivers/postgresql | ||
touch $ODBCSYSINI/pro_drivers/postgresql.tar.gz | ||
curl ${{ secrets.PRO_DRIVER_POSTGRESQL }} --output $ODBCSYSINI/pro_drivers/postgresql.tar.gz | ||
tar -xvzf $ODBCSYSINI/pro_drivers/postgresql.tar.gz -C $ODBCSYSINI/pro_drivers/postgresql | ||
- name: Install Snowflake Driver | ||
run: | | ||
echo "ODBC_CS_SNOWFLAKE=dsn=Snowflake" >> $GITHUB_ENV | ||
mkdir -p $ODBCSYSINI/pro_drivers/snowflake | ||
touch $ODBCSYSINI/pro_drivers/snowflake.tar.gz | ||
curl ${{ secrets.PRO_DRIVER_SNOWFLAKE }} --output $ODBCSYSINI/pro_drivers/snowflake.tar.gz | ||
tar -xvzf $ODBCSYSINI/pro_drivers/snowflake.tar.gz -C $ODBCSYSINI/pro_drivers/snowflake | ||
echo "Driver=$ODBCSYSINI/pro_drivers/snowflake/bin/lib/libsnowflakeodbc_sb64.so" | tee -a $ODBCSYSINI/odbc.ini | ||
# note that this assumes Snowflake is the last odbc.ini entry | ||
- name: Prepare Snowflake private key | ||
run: | | ||
echo "${{ secrets.SNOWFLAKE_PRIVATE_KEY }}" > $ODBCSYSINI/private_key.pem | ||
echo "PRIV_KEY_FILE=$ODBCSYSINI/private_key.pem" | tee -a $ODBCSYSINI/odbc.ini | ||
export SNOWFLAKE_PRIVATE_KEY_EXISTS=TRUE | ||
- name: Install dependencies | ||
uses: r-lib/actions/setup-r-dependencies@v2 | ||
with: | ||
needs: check | ||
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- name: Install locally to avoid error with test_local() | ||
run: | | ||
R CMD INSTALL . | ||
env: | ||
LIB_DIR: /usr/lib/x86_64-linux-gnu/ | ||
INCLUDE_DIR: /usr/include | ||
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- name: Test | ||
run: | | ||
options("odbc.interruptible"=TRUE);testthat::test_local(reporter = testthat::ProgressReporter$new(max_failures = Inf, update_interval = Inf)) | ||
shell: Rscript {0} |
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