Rewrite github tests

.github/workflows/main.yml

@@ -7,39 +7,43 @@ on:
  - master
 
 jobs:
- test-on-linux:
+ run-tests:
  runs-on: ${{ matrix.os }}
  name: sunode - ${{ matrix.os }} - ${{ matrix.python-version }}
- defaults:
- run:
- shell: bash -l {0}
  strategy:
  max-parallel: 6
  fail-fast: false
  matrix:
  os: ["ubuntu-latest", "windows-latest"]
- python-version: ["3.9", "3.10", "3.11"]
+ python-version: ["3.9", "3.10", "3.11", "3.12"]
  steps:
- - uses: actions/checkout@v3
+ - uses: actions/checkout@v4
+ - name: Install micromamba
+ uses: mamba-org/setup-micromamba@v1
  with:
- path: "sunode"
- - name: Install miniconda
- uses: conda-incubator/setup-miniconda@v2
- with:
- auto-update-conda: true
- activate-environment: sunode-dev
- miniforge-version: latest
- python-version: ${{ matrix.python-version }}
- - name: Install Dependences
- run: |
- conda install --yes conda-build boa conda-verify pytest pytest-cov hypothesis statsmodels pytensor c-compiler
- - name: Build package
+ environment-name: sunode-dev
+ create-args: >-
+ python=${{ matrix.python-version }}
+ pytest
+ pytest-cov
+ hypothesis
+ statsmodels
+ pytensor
+ c-compiler
+ sundials<6.0
+ numba
+ sympy
+ typing_extensions
+ cffi
+ xarray
+ init-shell: bash powershell
+ - name: Get some debugging info
  run: |
- conda mambabuild --variants "{python: [${{ matrix.python-version }}]}" ./sunode/conda
- - name: Install package 
+ env
+ which gcc
+ - name: Install sunode
  run: |
- conda install --yes -c file:///${CONDA_PREFIX}/conda-bld/ sunode
+ pip install -e .
  - name: Test with coverage
  run: |
- # conda activate doesn't seem to set paths to the conda prefix correctly
- env LD_LIBRARY_PATH=${CONDA_PREFIX}/lib pytest --cov=sunode --cov-report xml --cov-report term-missing sunode
+ pytest --cov=sunode --cov-report xml --cov-report term-missing sunode