Saving SAM read alignment with match chromosome/position, not the kme… #14

	name: Release

	on:
	push:
	tags:
	- '*'

	jobs:

	release:
	runs-on: ${{ matrix.os }}

	strategy:
	fail-fast: false

	matrix:
	os: [ubuntu-latest, macos-latest]

	include:
	- os: ubuntu-latest
	cmake_generator: "Unix Makefiles"
	- os: macos-latest
	cmake_generator: "Unix Makefiles"

	defaults:
	run:
	shell: bash -l {0}

	steps:
	- uses: actions/checkout@v2

	- name: Setup (Linux)
	if: runner.os == 'Linux'
	run: \|
	sudo apt-get update
	sudo apt-get install libcurl4-openssl-dev

	- name: Setup Envvars
	run: \|
	echo "GUIDESCAN_VERSION=${GITHUB_REF/refs\/tags\//}" >> $GITHUB_ENV
	echo "GUIDESCAN_NAME=guidescan-${GITHUB_REF/refs\/tags\//}-${{ runner.os }}" >> $GITHUB_ENV

	- name: Build
	run: \|
	cmake -DGUIDESCAN_VERSION=$GUIDESCAN_VERSION -G "${{ matrix.cmake_generator }}" -S . -B build
	cmake --build build

	- name: Guidescan version
	run: \|
	./build/bin/guidescan --version

	- name: Generate binary release file
	run: \|
	mkdir -p $GUIDESCAN_NAME/bin
	cp -r include $GUIDESCAN_NAME/
	cp -r scripts $GUIDESCAN_NAME/
	cp build/bin/guidescan* $GUIDESCAN_NAME/bin/
	cd $GUIDESCAN_NAME && tar -czvf ../$GUIDESCAN_NAME.tar.gz *

	- name: Release binary
	uses: softprops/action-gh-release@v1
	with:
	files: ${{env.GUIDESCAN_NAME}}.tar.gz

	- name: Generate source release file
	if: ${{ runner.os == 'Linux' }}
	run: \|
	git ls-files \| tar czf guidescan-${{env.GUIDESCAN_VERSION}}-src.tar.gz --files-from -

	- name: Release source
	if: ${{ runner.os == 'Linux' }}
	uses: softprops/action-gh-release@v1
	with:
	files: guidescan-${{env.GUIDESCAN_VERSION}}-src.tar.gz

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