Working with contig files

Updating genome feature coordinates

1. Make the change in artemis
2. add /controlled_curation="term=warning, gene structure updated; date=XXXXXX"
3. include/ change PMID of the reference if necessary
4. Add a row for the change to be flagged in the website: https://github.com/pombase/curation/blob/master/data_files/gene-coordinate-change-data.tsv

Annotating complementation with foreign gene

qualifier full or partial

/controlled_curation="term=complementation, functionally complemented by S. cerevisiae STE20; qualifier=full;

Can also be used for negative annotation of complementation:

FT                   /controlled_curation="term=complementation, does not
FT                   functionally complement S. cerevisiae CDC28;