Repositories list

• pritykinlab_onboarding

  Public
  Shell

  •1•0•0•0•Updated Nov 4, 2024Nov 4, 2024

• gloss-paper-analysis

  Public
  companion to Gloss package, holding paper analysis

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

• ArchVelo

  Public
  Python

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• Gloss

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated Oct 28, 2024Oct 28, 2024

• metadomain_paper

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Oct 14, 2024Oct 14, 2024

• InterDomain

  Public
  Code to run metadomain calling on your dataset

  Python

  •0•0•0•0•Updated Oct 9, 2024Oct 9, 2024

• guidescanpy

  Public
  Python

  •1•1•8•2•Updated Sep 23, 2024Sep 23, 2024

• guidescan-cli

  Public
  a guideRNA database generation tool

  bioinformaticscppbiology+ 7computational-biologybioinformatics-pipelinecrisprcrispr-cas9grnabioinformatics-toolcrispr-design

  C++

  •5•13•7•0•Updated Sep 16, 2024Sep 16, 2024

• ulipstic-analysis

  Public
  Jupyter Notebook

  •3•8•0•0•Updated Jul 9, 2024Jul 9, 2024

• preprocessing_benchmarking

  Public
  0•0•2•0•Updated Jun 5, 2024Jun 5, 2024

• pritykinlab.github.io

  Public
  HTML

  •0•1•0•0•Updated May 12, 2024May 12, 2024

• drosophila-microc-zga

  Public
  Analysis of Drosophila Micro-C at and around ZGA

  Jupyter Notebook

  •0•0•0•0•Updated Apr 10, 2024Apr 10, 2024

• guidescan-frontend

  Public
  JavaScript

  •1•0•0•0•Updated May 30, 2023May 30, 2023

• snakemake-bulkrna-seq

  Public
  A snakemake workflow for bulk RNA-seq data preprocessing including sequence alignment, quality check etc.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated May 4, 2023May 4, 2023

• guidescan-web

  Public
  A guideRNA design tool for the modern era.

  Clojure

  •

  Other

  •2•0•0•0•Updated Apr 20, 2023Apr 20, 2023

• bulkrna-differential-analysis

  Public
  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Feb 7, 2023Feb 7, 2023