Feature/update test run test #646
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…ncies adjust caiman dependencies
- enable debug level for optinist-logger - adjust logging-format
- improve error message - use constants
improve logger
improve snakemake runner
- Clarify definition and determination of NodeType (Data or Algo)
- Clarify definition and determination of NodeType (Data or Algo)
Use Enum, simplify implementation
improve workflow runner
update vscode settings (for prettier)
Add ExptDataWriter
- A seek(0) was needed before file write in rename().
Fixed ExptDataWriter bug
- add loading flag to <Loading /> - Unified variable naming rules - isLoading -> loading - selectLoadingXXX -> selectLoading
…ings Update settings and docs for multiuser mode
…p-doc modify doc internal link
…icon Refactoring loading icon display at API request
…rser Add a parser for each ID in the experiment output data path
…icon add loading icon for fetch workflow api
- add comments - change `docker compose` command to modern format
- Adjusted build_frontend to work properly - Adjustment of useless container removal behavior - Removed --remove-orphans from docker compose down s- Added rm_unused_docker_containers function
Update optinist Makefile
- Stabilize and speed up create env (mainly for apple sillicon machine)
Feature/add development info
…-yaml improve suite2p conda yaml
- makefile
- keep test docker image
- docker files
- docker-compose
- rename docker-compose service name
- dockerfile
- build conda environment in dockerfile
- keep poetry install status
- fixed snakemake to run properly - add and update files needed for testing (.yaml, .pkl) - organized test cases
- organize test data input/output paths - detailed factoring of test code
- Switch between test_backend (lighter process) and test_backend_full (heavier process)
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