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@nuno-agostinho nuno-agostinho released this 30 Oct 11:12
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Interactive functions for loading data and analysing results

  • New Shiny-based graphical interface functions:
    • launchDiffExprLoader(): load differential expression data
    • launchCMapDataLoader(): load CMap data
    • launchResultPlotter(): view and plot data results
    • launchMetadataViewer(): check metadata of a given object

Major changes

  • downloadENCODEknockdownMetadata(): metadata is now automatically saved to a file in order to avoid downloading metadata every time this function is run
  • plotTargetingDrugsVSsimilarPerturbations():
    • automatically look for matching compounds in multiple columns of both datasets
    • allow to manually select columns on which to merge datasets
  • prepareDrugSets(): drug sets based on numeric molecular descriptors are now prepared using evenly-distributed intervals
  • Simplified tutorial