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Replaced manually generated interfaces with auto-converted from Nipype #8

Merged
merged 18 commits into from
Nov 6, 2023
Merged

Replaced manually generated interfaces with auto-converted from Nipype #8

merged 18 commits into from
Nov 6, 2023

Commits on Nov 6, 2023

  1. changed a few things to hopefully get the auto package to import

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  2. explicitly add auto package to pyproject.toml so it isn't excluded

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  3. strip auto package from gitignore when building package on github

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  4. add freesurfer installation to test jobs

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  5. added fileformats packages into repository

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  6. commented out fileformats tests as they are currently empty

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  7. added fileformats-medimage-freesurfer to extras test

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  8. added fileformats-medimage-freesurfer to dev check install

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  9. changed message to check for when seeing if auto packages have been g… 

    …enerated
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  10. add freesurfer license key to test gha job

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  11. removed matrix from deploy node

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  12. dropped 3.11 from test matrix

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  13. trying to get freesurfer gha install to work

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  14. remove unneccessary tools to free space in image

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  15. add freesurfer bin to path

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  16. moved fileformats inside fileformats directory

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  17. changed order of installation in devcheck

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  18. moved install of fileformats into separate step

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