Skip to content

Pull requests: nf-core/modules

New pull request New
142 Open 4,904 Closed
142 Open 4,904 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Add gzip support and multiple files for gawk
#6810 opened Oct 19, 2024 by LouisLeNezet Loading…
4 of 17 tasks
1
More module updates
#6809 opened Oct 19, 2024 by pinin4fjords Loading…
17 tasks
Tryin to fix bismark
#6807 opened Oct 18, 2024 by maxulysse Loading…
17 tasks
update elprep/filter
#6806 opened Oct 18, 2024 by nvnieuwk Loading…
17 tasks
1
Update Version of UMICollapse to 1.1.0
#6805 opened Oct 18, 2024 by MatthiasZepper Loading…
1 task done
1
Update Hifiasm to 0.19.9
#6796 opened Oct 17, 2024 by Schmytzi Loading…
6 of 14 tasks
15
Update limma modelling approach
#6795 opened Oct 17, 2024 by pinin4fjords • Draft
17 tasks
init pb fq2bam_meth module
#6792 opened Oct 17, 2024 by sateeshperi Loading…
@sateeshperi
Move nf-tests to single config
#6788 opened Oct 16, 2024 by mahesh-panchal • Draft
17 tasks
Update containers to 2.7.1
#6786 opened Oct 15, 2024 by eperezme Loading…
3
Add nf-test to vcf_annotation_ensemblvep_snpeff + some general fixes
#6779 opened Oct 14, 2024 by nvnieuwk Loading…
17 tasks
5
Use /tmp directory as STAR temp folder
#6775 opened Oct 14, 2024 by bounlu Loading…
7 of 17 tasks
1
Fixed linked site location for bbam tools
#6768 opened Oct 10, 2024 by J-Moravec Loading…
Be consistent in GHA names, only use Setup, remove Set up or Install
#6766 opened Oct 10, 2024 by maxulysse Loading…
17 tasks
11
Limma mixed models feature
#6753 opened Oct 8, 2024 by KamilMaliszArdigen Loading…
17 tasks
48
Pypgx/preparedepthofcoverage new module Adding a new module Ready for Review
#6729 opened Oct 4, 2024 by Jorisvansteenbrugge Loading…
11 tasks done
1
Pypgx/computecontrolstatistics new module Adding a new module Ready for Review
#6728 opened Oct 3, 2024 by Jorisvansteenbrugge Loading…
11 of 13 tasks
1
[do not merge] stress testing PR #6286
#6716 opened Sep 30, 2024 by adamrtalbot Loading…
5
chore(#6505): Capture actual version yaml instead of hash
#6704 opened Sep 27, 2024 by edmundmiller Loading…
@edmundmiller
Add irescue module new module Adding a new module Ready for Review
#6691 opened Sep 25, 2024 by bepoli Loading…
17 tasks done
1
Fix typo in variable name in CHECKM/QA (plus some formatting fixes)
#6680 opened Sep 20, 2024 by jfy133 Loading…
17 tasks
2
update JSON schema for subworkflows meta.yml
#6679 opened Sep 20, 2024 by mirpedrol Loading…
7
Fix bcftools stubs to behave like program
#6666 opened Sep 19, 2024 by fellen31 • Draft
17 tasks
Script to fetch unique conda environments
#6659 opened Sep 17, 2024 by ewels • Draft
1
Migrate umitools/group to nf-test
#6653 opened Sep 16, 2024 by SPPearce Loading…
4
ProTip! What’s not been updated in a month: updated:<2024-09-19.