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Display 3D trajectories, with a grid interface #193

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Display 3D trajectories, with a grid interface #193

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Commits on Apr 26, 2024

  1. Added

    chaithyagr committed Apr 26, 2024
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  2. Merge branch 'mind-inria:master' into master

    @chaithyagr
    chaithyagr authored Apr 26, 2024
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  3. Fix

    chaithyagr committed Apr 26, 2024
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  4. Merge branch 'master' of github.com:chaithyagr/mri-nufft

    chaithyagr committed Apr 26, 2024
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  5. Remove bymistake add

    chaithyagr committed Apr 26, 2024
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  6. Fix

    chaithyagr committed Apr 26, 2024
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  7. Fixed lint

    chaithyagr committed Apr 26, 2024
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  8. Lint

    chaithyagr committed Apr 26, 2024
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  9. Added refbackend

    chaithyagr committed Apr 26, 2024
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  10. Fix NDFT

    chaithyagr committed Apr 26, 2024
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Commits on Apr 29, 2024

  1. feat: use finufft as ref backend.

    @paquiteau
    paquiteau committed Apr 29, 2024
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  2. feat(tests): move ndft vs nufft tests to own file.

    @paquiteau
    paquiteau committed Apr 29, 2024
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  3. Merge branch 'master' of github.com:mind-inria/mri-nufft

    chaithyagr committed Apr 29, 2024
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Commits on Apr 30, 2024

  1. Merge branch 'master' of github.com:mind-inria/mri-nufft

    chaithyagr committed Apr 30, 2024
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Commits on Jun 17, 2024

  1. Merge branch 'master' of github.com:mind-inria/mri-nufft

    chaithyagr committed Jun 17, 2024
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Commits on Jul 1, 2024

  1. Merge branch 'master' of github.com:mind-inria/mri-nufft

    chaithyagr committed Jul 1, 2024
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Commits on Aug 1, 2024

  1. Merge branch 'master' of github.com:chaithyagr/mri-nufft

    @chaithyagr
    chaithyagr committed Aug 1, 2024
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Commits on Aug 8, 2024

  1. fix typoes (off_resonnance -> off_resonance)

    @mcencini
    mcencini committed Aug 8, 2024
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  2. feat: add field interpolators calculation (mind-inria#124) 

    This add "get_interpolators_from_fieldmap", supporting both real (B0 map only) and complex (Zmap = R2* + 1j * B0map) fields
in arbitrary dimension (2D and 3D). The routine supports both numpy / cupy arrays and torch tensors on CPU and GPU,
the latter requiring cupy due to limitations in torch.histogram / torch.histogramdd (pytorch/pytorch#69519).

Calculation uses time segmentation with uniform time samples and LS coefficients (using histogram).

Based on MIRT (https://github.com/JeffFessler/mirt/blob/main/mri/mri_exp_approx.m)
and its Python porting from MIRTORCH (https://github.com/guanhuaw/MIRTorch/blob/master/mirtorch/linear/mri.py)
and SigPy (https://github.com/mikgroup/sigpy/blob/main/sigpy/mri/util.py).
    @mcencini
    mcencini committed Aug 8, 2024
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  3. Merge branch 'mind-inria:master' into off_resonance

    @mcencini
    mcencini authored Aug 8, 2024
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Commits on Aug 9, 2024

  1. feat: field interpolator estimation in MRIFourierCorrected constructor. 

    In addition, add off-resonance example.
    @mcencini
    mcencini committed Aug 9, 2024
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  2. Merge branch 'off_resonance' of github.com:mcencini/mri-nufft into of… 

    …f_resonance
    @mcencini
    mcencini committed Aug 9, 2024
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  3. feat: set autograd_available based on base FourierOperator

    @mcencini
    mcencini committed Aug 9, 2024
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  4. Merge branch 'mind-inria:master' into off_resonance

    @mcencini
    mcencini authored Aug 9, 2024
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  5. Update test_offres_exp_approx.py 

    Avoid torch cuda test case if cupy is not available.
    @mcencini
    mcencini authored Aug 9, 2024
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Commits on Aug 30, 2024

  1. Merge branch 'mind-inria:master' into off_resonance

    @mcencini
    mcencini authored Aug 30, 2024
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  2. Update src/mrinufft/operators/off_resonance.py 

    remove deprecated get_grad

Co-authored-by: Chaithya G R <[email protected]>
    @mcencini @chaithyagr
    mcencini and chaithyagr authored Aug 30, 2024
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  3. address pr review

    @mcencini
    mcencini committed Aug 30, 2024
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  4. remove phantominator

    @mcencini
    mcencini committed Aug 30, 2024
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Commits on Sep 2, 2024

  1. remove duplicated example and replacing subject in example_offres

    @mcencini
    mcencini committed Sep 2, 2024
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  2. address PR rev mind-inria#2

    @mcencini
    mcencini committed Sep 2, 2024
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Commits on Sep 3, 2024

  1. Merge branch 'master' into off_resonance

    @chaithyagr
    chaithyagr authored Sep 3, 2024
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  2. \!docs_build and fix on \!style

    @chaithyagr
    chaithyagr committed Sep 3, 2024
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  3. \!docs_build

    @chaithyagr
    chaithyagr committed Sep 3, 2024
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  4. skip field coefficient gpu test case if cupy not available

    @mcencini
    mcencini committed Sep 3, 2024
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  5. \!docs_build fix gpuNUFFT

    @chaithyagr
    chaithyagr committed Sep 3, 2024
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Commits on Sep 5, 2024

  1. Merge branch 'master' of github.com:mind-inria/mri-nufft

    @chaithyagr
    chaithyagr committed Sep 5, 2024
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  2. Update src/mrinufft/operators/off_resonance.py 

    Co-authored-by: Guillaume Daval-Frérot <[email protected]>
    @mcencini @Daval-G
    mcencini and Daval-G authored Sep 5, 2024
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  3. Update src/mrinufft/operators/off_resonance.py 

    Co-authored-by: Guillaume Daval-Frérot <[email protected]>
    @mcencini @Daval-G
    mcencini and Daval-G authored Sep 5, 2024
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  4. \!docs_build gpunufft

    @chaithyagr
    chaithyagr committed Sep 5, 2024
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  5. Merge branch 'off_resonance' of github.com:mcencini/mri-nufft into pr… 

    …/mcencini/180
    @chaithyagr
    chaithyagr committed Sep 5, 2024
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  6. Update src/mrinufft/operators/off_resonance.py 

    Co-authored-by: Guillaume Daval-Frérot <[email protected]>
    @mcencini @Daval-G
    mcencini and Daval-G authored Sep 5, 2024
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  7. Merge branch 'off_resonance' of github.com:mcencini/mri-nufft into pr… 

    …/mcencini/180
    @chaithyagr
    chaithyagr committed Sep 5, 2024
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  8. Update src/mrinufft/operators/off_resonance.py 

    Co-authored-by: Guillaume Daval-Frérot <[email protected]>
    @mcencini @Daval-G
    mcencini and Daval-G authored Sep 5, 2024
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  9. address PR rev 3

    @mcencini
    mcencini committed Sep 5, 2024
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Commits on Sep 6, 2024

  1. Update pyproject.toml

    @chaithyagr
    chaithyagr authored Sep 6, 2024
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Commits on Sep 9, 2024

  1. Merge branch 'master' into off_resonance

    @chaithyagr
    chaithyagr authored Sep 9, 2024
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Commits on Sep 12, 2024

  1. Update src/mrinufft/operators/off_resonance.py 

    Co-authored-by: Guillaume Daval-Frérot <[email protected]>
    @mcencini @Daval-G
    mcencini and Daval-G authored Sep 12, 2024
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Commits on Sep 13, 2024

  1. \![docs_build]

    @chaithyagr
    chaithyagr committed Sep 13, 2024
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  2. Merge branch 'master' into display_dens

    @chaithyagr
    chaithyagr committed Sep 13, 2024
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  3. Add 3D trajectory viewer

    @chaithyagr
    chaithyagr committed Sep 13, 2024
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Commits on Sep 16, 2024

  1. Add supoport for grads and slew

    @chaithyagr
    chaithyagr committed Sep 16, 2024
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Commits on Sep 17, 2024

  1. Merge branch 'master' into display_dens

    @chaithyagr
    chaithyagr authored Sep 17, 2024
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Commits on Sep 27, 2024

  1. Merge branch 'master' into display_dens

    @chaithyagr
    chaithyagr authored Sep 27, 2024
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  2. Fix ruff

    @chaithyagr
    chaithyagr committed Sep 27, 2024
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Commits on Oct 7, 2024

  1. Merge branch 'master' into display_dens

    @chaithyagr
    chaithyagr authored Oct 7, 2024
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