AllocateMate is a R package (R Core Team 2016) comprised of two primary functions: allocate.mate.ped and allocate.mate.H
-
AllocateMate generates a mating list for a set of parents.
-
The mating list can be generated i) to minimise the average inbreeding coefficient (F) of families generated or ii) according to assortative mating principles.
-
AllocateMate requires the following CRAN packages: lpSolveAPI, dplyr, AGHmatrix
-
install.packages(c("lpSolveAPI", "dplyr", "AGHmatrix"))
-
install.packages("devtools")
-
library(devtools)
-
install_github("mghamilton/AllocateMate")
-
library(AllocateMate)
-
help ("allocate.mate.ped")
-
help ("allocate.mate.H")
- R Core Team (2016) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria