Skip to content

🐛 fix hard filter #15

🐛 fix hard filter

🐛 fix hard filter #15

name: Update Docker Tables
on: [pull_request]
permissions:
contents: write
pull-requests: write
jobs:
update-tables:
name: Update Docker Tables
runs-on: ubuntu-22.04
steps:
- id: checkout
uses: actions/checkout@v3
name: Checkout Repo
with:
ref: ${{ github.head_ref }}
- id: make-germline-table
name: Make Docker Table for Germline Workflow
run: |
python .github/scripts/workflow_to_docker_table.py --output_file docs/dockers_consensus.md workflows/kfdrc-germline-snv-annot-workflow.cwl
- id: make-somatic-table
name: Make Docker Table for Somatic Workflow
run: |
python .github/scripts/workflow_to_docker_table.py --output_file docs/dockers_somatic.md workflows/kfdrc-somatic-snv-annot-workflow.cwl
- id: cpr
name: Create Pull Request
uses: peter-evans/create-pull-request@v5
with:
commit-message: update docker table
title: Update Production WF Docker Tables
body: |
Automated changes by [create-pull-request](https://github.com/peter-evans/create-pull-request) GitHub action.
Docker tables for production workflows now have most up-to-date and complete list of Dockers.
delete-branch: true
branch: ${{ github.head_ref }}-adjust-dockers
labels: bix-dev