Awesome Health

A curated list of awesome open source health software, libraries, tools and resources, inspired by awesome-postgresql.

Contents

• Awesome Health
  • EHR
  • Specifications
  • Prescribing
  • Nursing
  • Radiology
  • Dental
  • Laboratory
  • Libraries
  • Frameworks
  • Applications
  • Personal Health Record
  • Integration
  • Research
  • Hardware
  • Bioinformatics
  • Datasets
  • Enterprise Master Patient Index

EHR

• Bahmni - Hospital system.
• EHRServers - The openEHR clinical data repository.
• GNU Health - Electronic Medical Record (EMR), Hospital Management, and Health Information System (HIS).
• GNUmed - Electronic Medical Record software.
• EHRServer - Generic, minimal, standards-based, service-oriented, openEHR clinical data storage.
• FreeHealth EHR - Electronic Health Record software.
• FreeMedForms EMR - Electronic Medical Record software.
• HospitalRun - HospitalRun is built to provide the most modern hospital information system possible to the least resourced environments.
• Odoo Medical - Universal Health and Hospital Information System.
• OpenClinic - Medical Records System.
• OpenEMR - Electronic Health Records and medical practice management application.
• OpenEyes - Electronic Medical Record application for ophthalmology.
• openMAXIMS - Full Patient Administration System designed for the NHS.
• OpenMRS - Enterprise Electronic Medical Record system platform.
• OSCAR EMR - Electronic Medical Record software.
• Ripple - NHS funded community led initiative towards an integrated digital care record platform.
• VistA - Health Information Technology system.

Specifications

• FHIR - Fast Health Interoperability Resources.
• OpenEHR - Open specification from which software can be built on.
• SMART on FHIR - Open standards based technology platform.
• StandardHealthRecord - Open specification for health record format, aiming to be more precise than existing formats.
• Continuity of Care Document - Continuity of Care Document Overview.
• Continuity of Care Record - Understanding the Continuity of Care Record.

Prescribing

• OpenEP - Suite of medicines management apps that improve the safety and efficiency of prescribing and medicines management.

Nursing

• open-eObs - Observation and clinical assessment platform that offers a real-time view of all patients across a ward.

Radiology

• dcm4che - Clinical Image and Object Management.
• Horos - Medical image viewer.
• OpenREM - Radiation Exposure Monitoring for physicists.
• Orthanc - Lightweight DICOM server for healthcare and medical research.

Dental

• Open Dental - Practice Management Software.

Laboratory

• Bika - LIMS.
• OpenELIS - Laboratory Information System for Global Health.

Frameworks

• API Server - FHIR Server to support patient and clinician-facing apps.
• C3-PRO-Server - Highly reliable and scalable FHIR compliant web server.
• CareKit - CareKit is an open source software framework for creating apps that help people better understand and manage their health.
• Clinical Meteor project - Meteor for FDA, HIPPA, and HL7 compliant applications.
• FHIRBase - Storage based on the FHIR Standard.
• Intervention Engine FHIR Server - Generic FHIR server implementation in GoLang.
• Opal - Framework for building clinical applications.
• ResearchKit - Software framework that makes it easy to create apps for medical research or for other research projects.
• Spark - FHIR server.
• Swift-SMART - Swift SMART on FHIR framework for iOS and OS X.

Libraries

• FHIR .NET API - The official .NET API for HL7 FHIR.
• fhir.js - JavaScript client for FHIR.
• HAPI FHIR - Java API for HL7 FHIR Clients and Servers.
• MITK - The Medical Imaging Interaction Toolkit.
• Node HL7 - Node module that is bridged with the Java Hapi HL7 library.
• Python HL7 - Simple library for parsing messages of HL7 version 2.x into Python objects.
• Ruby FHIR - FHIR client implementation in Ruby.
• Ruby HL7 - Ruby HL7 library.

Applications

• Intervention Engine - The Intervention Engine project provides a web-application for data-driven team huddles.
• SMART Pediatric Growth Chart - Pediatric growth charts.

PHR

• Tidepool - Data platform to reduce the burden of Type 1 Diabetes.

Research

• i2b2 - Research data warehouse.
• LabKey Server - Platform for Translational Research.
• Open cancer - Cancer data management.

Integration

• Mirth Connect - Cross-platform interface engine that enables bi-directional sending of HL7 messages between systems and applications.
• OpenHIM - Health information mediator.

Hardware

• echOpen - Low-cost (affordable) echo-stethoscope.
• Gluco - Glucometer.
• MobilECG II - Clinical grade Holter ECG.
• Murgen - Ultrasound imaging development kit.
• OpenAPS - The Open Artificial Pancreas System project is an open and transparent effort to make safe and effective basic Artificial Pancreas System (APS).

Bioinformatics

• ADAM - Genomics analysis platform.
• Bcbio - Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis.
• Galaxy - Open web-based platform for data intensive biomedical research.
• Wregex - Amino acid motif searching software with optional Position-Specific Scoring Matrix (PSSM).

Datasets

• openSNP - Repository to which users can upload their SNP-sets.
• TCIA - The Cancer Imaging Archive.

EMPI

• MEDIC Client Registry RI - The Mohawk College MARC-HI/MEDIC Client Registry EMPI Implementation.
• OpenEMPI - Feature-full EMPI solution.