A Python module and command line tool for parsing Fortran namelist files
Documentation: http://f90nml.readthedocs.org/en/latest/
f90nml
is a Python module and command line tool that provides a simple
interface for the reading, writing, and modifying Fortran namelist files.
A namelist file is parsed and converted into an Namelist
object, which
behaves like a standard Python dict
. Values are converted from Fortran
data types to equivalent primitive Python types.
The command line tool f90nml
can be used to modify individual values inside
of a shell environment. It can also be used to convert the data between
namelists and other configuration formats. JSON and YAML formats are currently
supported.
To read a namelist file sample.nml
which contains the following namelists:
&config_nml
input = 'wind.nc'
steps = 864
layout = 8, 16
visc = 1.0e-4
use_biharmonic = .false.
/
we would use the following script:
import f90nml
nml = f90nml.read('sample.nml')
which would would point nml
to the following dict
:
nml = {
'config_nml': {
'input': 'wind.nc',
'steps': 864,
'layout': [8, 16],
'visc': 0.0001,
'use_biharmonic': False
}
}
File objects can also be used as inputs:
with open('sample.nml') as nml_file:
nml = f90nml.read(nml_file)
To modify one of the values, say steps
, and save the output, just
manipulate the nml
contents and write to disk using the write
function:
nml['config_nml']['steps'] = 432
nml.write('new_sample.nml')
Namelists can also be saved to file objects:
with open('target.nml') as nml_file:
nml.write(nml_file)
To modify a namelist but preserve its comments and formatting, create a
namelist patch and apply it to a target file using the patch
function:
patch_nml = {'config_nml': {'visc': 1e-6}}
f90nml.patch('sample.nml', patch_nml, 'new_sample.nml')
A command line tool is provided to manipulate namelist files within the shell:
$ f90nml config.nml -g config_nml -v steps=432
&config_nml
input = 'wind.nc'
steps = 432
layout = 8, 16
visc = 1.0e-4
use_biharmonic = .false.
/
See the documentation for details.
f90nml
is available on PyPI and can be installed via pip:
$ pip install f90nml
It is also available on Arch Linux via the AUR:
$ git clone https://aur.archlinux.org/python-f90nml.git $ cd python-f90nml $ makepkg -sri
f90nml
is currently not available on other Linux distributions.
The latest version of f90nml
can be installed from source:
$ git clone https://github.com/marshallward/f90nml.git $ cd f90nml $ python setup.py install
Users without install privileges can append the --user
flag to
setup.py
:
$ python setup.py install --user