Skip to content

Commit

Permalink
rename viridian workflow to viridian
Browse files Browse the repository at this point in the history
  • Loading branch information
martinghunt authored Apr 26, 2024
1 parent e0250ec commit 24ffe1c
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,10 +1,10 @@
![Build Status](https://github.com/iqbal-lab-org/viridian_workflow/actions/workflows/build.yaml/badge.svg)
![Build Status](https://github.com/iqbal-lab-org/viridian/actions/workflows/build.yaml/badge.svg)

# Viridian Workflow
# Viridian

Ultra-careful amplicon-aware viral assembly for tiled amplicon schemes.

Please see the [Viridian Workflow Wiki](https://github.com/iqbal-lab-org/viridian_workflow/wiki)
Please see the [Viridian Wiki](https://github.com/iqbal-lab-org/viridian/wiki)
for full documentation.

## Installation
Expand Down Expand Up @@ -77,7 +77,7 @@ The default files in the output directory are:
* `variants.vcf`: a VCF file of the identified variants between the consensus
sequence and the reference genome.
* `log.json.gz`: a gzipped JSON file that contains logging information
for the viridian workflow run.
for the viridian run.
* `qc.tsv.gz`: a gzipped tab-delimited file of per-base QC information
* `scheme_id.depth_across_genome.pdf`: a plot of the read depth across
the genome, with amplicons coloured in the background.
Expand Down

0 comments on commit 24ffe1c

Please sign in to comment.