[pre-commit.ci] auto fixes from pre-commit.com hooks

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icbi-lab · Sep 23, 2024 · ef99499 · ef99499
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Showing 13 changed files with 13 additions and 12 deletions.
diff --git a/_preprocessing/prepare_input_datasets.py b/_preprocessing/prepare_input_datasets.py
@@ -5,7 +5,7 @@
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diff --git a/_preprocessing/subsample_luca.py b/_preprocessing/subsample_luca.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/01_merge.py b/docs/notebooks/01_merge.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/02_qc.py b/docs/notebooks/02_qc.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/03_seed_annotation.py b/docs/notebooks/03_seed_annotation.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/04_integrate_scvi.py b/docs/notebooks/04_integrate_scvi.py
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diff --git a/docs/notebooks/05_cell_type_annotation.py b/docs/notebooks/05_cell_type_annotation.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/06_differential_expression.py b/docs/notebooks/06_differential_expression.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/09_compositional.py b/docs/notebooks/09_compositional.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/10_bulk_integration.py b/docs/notebooks/10_bulk_integration.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/10_functional_analysis.py b/docs/notebooks/10_functional_analysis.py
@@ -5,7 +5,7 @@
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diff --git a/docs/notebooks/15_cell_cell_communication.py b/docs/notebooks/15_cell_cell_communication.py
@@ -5,7 +5,7 @@
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diff --git a/src/atlas_protocol_scripts/tl/_cell2cell.py b/src/atlas_protocol_scripts/tl/_cell2cell.py
@@ -2,6 +2,7 @@
 
 Focuses on differential cellphonedb analysis between conditions.
 """
+
 from typing import Literal
 
 import altair as alt