Deploy COVID scenario to ACI #1
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| # This workflow uses actions that are not certified by GitHub. | |
| # They are provided by a third-party and are governed by | |
| # separate terms of service, privacy policy, and support | |
| # documentation. | |
| # GitHub recommends pinning actions to a commit SHA. | |
| # To get a newer version, you will need to update the SHA. | |
| # You can also reference a tag or branch, but the action may change without warning. | |
| name: Deploy COVID scenario to ACI | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| contract: | |
| description: "Contract ID" | |
| required: true | |
| env: | |
| CONTAINER_REGISTRY: ${{ vars.CONTAINER_REGISTRY }} | |
| CONTAINER_REGISTRY_USERNAME: ${{ secrets.CONTAINER_REGISTRY_USERNAME }} | |
| CONTAINER_REGISTRY_PASSWORD: ${{ secrets.CONTAINER_REGISTRY_ACCESS_TOKEN }} | |
| AZURE_RESOURCE_GROUP: ${{ vars.AZURE_RESOURCE_GROUP }} | |
| AZURE_STORAGE_ACCOUNT_NAME: ${{ vars.AZURE_STORAGE_ACCOUNT_NAME }} | |
| AZURE_ICMR_CONTAINER_NAME: ${{ vars.AZURE_ICMR_CONTAINER_NAME }} | |
| AZURE_COWIN_CONTAINER_NAME: ${{ vars.AZURE_COWIN_CONTAINER_NAME }} | |
| AZURE_INDEX_CONTAINER_NAME: ${{ vars.AZURE_INDEX_CONTAINER_NAME }} | |
| AZURE_MODEL_CONTAINER_NAME: ${{ vars.AZURE_MODEL_CONTAINER_NAME }} | |
| AZURE_OUTPUT_CONTAINER_NAME: ${{ vars.AZURE_OUTPUT_CONTAINER_NAME }} | |
| AZURE_KEYVAULT_ENDPOINT: ${{ vars.AZURE_KEYVAULT_ENDPOINT }} | |
| TOOLS_HOME: ${{ github.workspace }}/external/confidential-sidecar-containers/tools | |
| DATA_DIRECTORY: ${{ github.workspace}}/scenarios/covid/data | |
| CONTRACT_SERVICE_URL: ${{ vars.CONTRACT_SERVICE_URL }} | |
| jobs: | |
| deploy-ccr-covid-aci: | |
| runs-on: [self-hosted, linux, X64] | |
| steps: | |
| - uses: AutoModality/action-clean@v1 | |
| - uses: actions/checkout@v3 | |
| - uses: pietrobolcato/install-azure-cli-action@main | |
| - name: Update submodules | |
| run: git submodule update --init --recursive | |
| - name: Set up Go | |
| uses: actions/setup-go@v4 | |
| with: | |
| go-version: '1.19.x' | |
| - name: Install jq | |
| run: sudo apt install -y jq | |
| - name: Log in with Azure | |
| uses: azure/login@v1 | |
| with: | |
| creds: '${{ secrets.AZURE_CREDENTIALS }}' | |
| - name: Login to Docker Hub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.CONTAINER_REGISTRY_USERNAME }} | |
| password: ${{ secrets.CONTAINER_REGISTRY_ACCESS_TOKEN }} | |
| - name: Install az confcom extension | |
| run: az extension add --name confcom -y | |
| - name: Add user to docker group | |
| run: sudo usermod -aG docker $USER | |
| - name: Run pre-processing | |
| run: cd ${{ github.workspace }}/scenarios/covid/deployment/docker && ./preprocess.sh | |
| - name: Run model saving | |
| run: cd ${{ github.workspace }}/scenarios/covid/deployment/docker && ./save-model.sh | |
| - name: Pull container images for generating policy | |
| run: cd ${{ github.workspace }}/ci && ./pull-containers.sh | |
| - name: Import data and model encryption keys with key release policies | |
| run: cd ${{ github.workspace }}/scenarios/covid/data && ./3-import-keys.sh | |
| - name: Encrypt data and models | |
| run: cd ${{ github.workspace }}/scenarios/covid/data && ./4-encrypt-data.sh | |
| - name: Upload data and model | |
| run: cd ${{ github.workspace }}/scenarios/covid/data && ./5-upload-encrypted-data.sh | |
| - name: Run training | |
| run: cd ${{ github.workspace }}/scenarios/covid/deployment/aci && ./deploy.sh -c ${{ github.event.inputs.contract }} -q ../../config/query_config.json -m ../../config/model_config.json | |
| - name: Dump training container logs | |
| run: sleep 200 && az container logs --name depa-training-covid --resource-group $AZURE_RESOURCE_GROUP --container-name depa-training | |
| - name: Dump sidecar container logs | |
| run: az container logs --name depa-training-covid --resource-group $AZURE_RESOURCE_GROUP --container-name encrypted-storage-sidecar | |
| - name: Download and decrypt model | |
| run: cd ${{ github.workspace }}/scenarios/covid/data && ./6-download-decrypt-model.sh | |
| - name: Cleanup data directory | |
| run: sudo rm -rf $DATA_DIRECTORY | |
| if: ${{ always() }} |