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General: Update description for SNARE-RNAseq2
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Juan Puerto committed Aug 29, 2024
1 parent 364bcbe commit 6b690cb
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions src/routes/assayclassifier/testing_rule_chain.json
Original file line number Diff line number Diff line change
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{
"type": "match",
"match": "not_dcwg and is_primary and assay_type in ['SNARE-RNAseq2', 'SNARE2-RNAseq']",
"value": "{'assaytype': 'SNARE-RNAseq2', 'dir-schema': 'scrnaseq-v0', 'tbl-schema': 'scrnaseq-v'+version.to_str, 'vitessce-hints': [], 'contains-pii': true, 'primary': true, 'description': 'snRNAseq (10x Genomics v3)', 'dataset-type': 'RNAseq' }",
"value": "{'assaytype': 'SNARE-RNAseq2', 'dir-schema': 'scrnaseq-v0', 'tbl-schema': 'scrnaseq-v'+version.to_str, 'vitessce-hints': [], 'contains-pii': true, 'primary': true, 'description': 'snRNAseq (SNAREseq2)', 'dataset-type': 'RNAseq' }",
"rule_description": "non-DCWG primary SNARE-RNAseq2"
},
{
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{
"type": "match",
"match": "is_dcwg and is_primary and dataset_type == 'RNAseq' and assay_input_entity == 'single nucleus' and barcode_read =~~ 'Read 2' and barcode_size == '8,8,8' and barcode_offset == '10,48,86' and umi_read =~~ 'Read 2' and umi_size == 10 and umi_offset == 0",
"value": "{'assaytype': 'SNARE-RNAseq2', 'vitessce-hints': [], 'dir-schema': 'rnaseq-v2', 'contains-pii': true, 'primary': true, 'dataset-type': 'RNAseq', 'description': 'snRNAseq (10x Genomics v3)'}",
"value": "{'assaytype': 'SNARE-RNAseq2', 'vitessce-hints': [], 'dir-schema': 'rnaseq-v2', 'contains-pii': true, 'primary': true, 'dataset-type': 'RNAseq', 'description': 'snRNAseq (SNAREseq2)'}",
"rule_description": "DCWG SNARE-RNAseq2"
},
{
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