Skip to content

Commit

Permalink
Adding another exercises. Updating the hardware info
Browse files Browse the repository at this point in the history
  • Loading branch information
bbrydsoe committed Sep 11, 2024
1 parent 6814264 commit 3146c8c
Show file tree
Hide file tree
Showing 4 changed files with 36 additions and 15 deletions.
13 changes: 12 additions & 1 deletion docs/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -42,14 +42,25 @@
- Birgitte Brydsö, HPC2N
- Pedro Ojeda-May, HPC2N

## Important info

- We have a course project: ``hpc2n2024-084``.
- The course project has default project storage. You can find that here: ``/proj/nobackup/intro-hpc2n``.
- You should create a subdirectory under ``/proj/nobackup/intro-hpc2n`` for yourself to do your exercises in. Make sure it is unique - your name/username is often a good option.
- As mentioned further up on the page, you can download the material for the course. Placing it in your directory on the project storage is a good idea. You can fetch it there with <code>git clone https://github.com/hpc2n/intro-course.git</code>.
- We have two reservations for the course (valid only during the course time). One L40s GPU (reservation ``intro-gpu``) and one AMD Zen4 CPU node (reservation ``intro-cpu``).
- The Q/A page can be found here: <a href="https://umeauniversity.sharepoint.com/:w:/s/HPC2N630/EcPoMJ8bnHlAg6pi97ufCagBBm2aMUHJIjcheFzp_uI2xQ?e=1wcfQl" target="_blank">https://umeauniversity.sharepoint.com/:w:/s/HPC2N630/EcPoMJ8bnHlAg6pi97ufCagBBm2aMUHJIjcheFzp_uI2xQ?e=1wcfQl</a>.
- The important info page is here: <a href="https://umeauniversity.sharepoint.com/:w:/s/HPC2N630/EQuc6COR0CFPtf0LXt3gIjgBB6z2gVObifWb6RnW_jKm1w?e=xUVztb" target="_blank">https://umeauniversity.sharepoint.com/:w:/s/HPC2N630/EQuc6COR0CFPtf0LXt3gIjgBB6z2gVObifWb6RnW_jKm1w?e=xUVztb</a>.
- There is an evaluation survey for the course. Please help us by filling it! It is here: <a href="https://forms.office.com/e/pipEictYtN" target="_blank">https://forms.office.com/e/pipEictYtN</a>.

## Preliminary schedule


| Time | Topic | Activity |
| ---- | ----- | -------- |
| 11:15 | Welcome+Syllabus | |
| 11:20 | Introduction to Kebnekaise and HPC2N | Lecture |
| 11:45 | Projects and accounts | Lecture |
| 11:40 | Projects and accounts | Lecture |
| 11:50 | Logging in & editors | Lecture+exercise |
| 12:05 | The File System | Lecture+code along |
| 12:15 | LUNCH BREAK | |
Expand Down
26 changes: 13 additions & 13 deletions docs/intro.md
Original file line number Diff line number Diff line change
Expand Up @@ -27,7 +27,7 @@ HPC2N provides state-of-the-art resources and expertise:
- Scalable and parallel **HPC**
- Large-scale **storage facilities** (Project storage (Lustre), SweStore, Tape)
- **Grid and cloud** computing (WLCG NT1, Swedish Science Cloud)
- National Data Science Node in ”Epidemiology and Biology of Infections” (DDLS)
- National Data Science Node in ”Epidemiology and Biology of Infections” (Data-Driven Life Science - DDLS)
- Software for e-Science applications
- All levels of user support
- Primary, advanced, dedicated
Expand Down Expand Up @@ -80,7 +80,7 @@ Involved in several **projects and collaborations**:
- Also at the partner sites
- Online "HPC2N fika"
- **User training and education program**
- 0.5 -- 5 days; ready-to-run exercises
- 0.5 -- 5 days; presentations and ready-to-run exercises
- intro courses: our system, Linux, R, Python, Julia, Matlab, Git
- intermediate courses
- - Parallel programming and tools (OpenMP, MPI, debugging, perf. analyzers, Matlab, R, MD simulation, ML, GPU, ...)
Expand Down Expand Up @@ -205,10 +205,6 @@ Kebnekaise have CPU-only, GPU enabled and large memory nodes.

The CPU-only nodes are:

- 2 x 14 core Intel broadwell
- 4460 MB memory / core
- 48 nodes
- Total of 41.6 TFlops/s
- 2 x 14 core Intel skylake
- 6785 MB memory / core
- 52 nodes
Expand All @@ -224,11 +220,6 @@ The CPU-only nodes are:

The GPU enabled nodes are:

- 2 x 14 core Intel broadwell
- 9000 MB memory / core
- 2 x Nvidia A40
- 4 nodes
- Total of 83 TFlops/s
- 2 x 14 core Intel skylake
- 6785 MB memory / core
- 2 x Nvidia V100
Expand All @@ -254,6 +245,15 @@ The GPU enabled nodes are:
- 6630 MB / core
- 4 x Nvidia H100 SXM5
- 2 nodes
- 2 x 32 core AMD zen4
- 11968 MB / core
- 6 x Nvidia L40s
- 2 nodes
- Can only use 10 cores/GPU
- 2 x 32 core AMD zen4
- 11968 MB / core
- 8 x Nvidia A40
- 2 nodes

The large memory nodes are:

Expand Down Expand Up @@ -335,8 +335,8 @@ I will cover more details in a later section, where we go more into detail about

#### Aggregating computing power

- 147 nodes totalling 6808 CPU cores and 64 GPUs (totalling 751616 CUDA cores, 33472 TENSOR cores + 960 matrix cores, 284 RT cores)
- Compared to 4-8 cores in a common modern laptop
- 95 nodes totalling 4792 CPU cores and 84 GPUs (totalling 1055744 CUDA cores, 43076 TENSOR cores + 960 matrix cores, 4544 RT cores)
- Compared to 4-8 cores in a common modern laptop + maybe 1 GPU

#### Higher performance

Expand Down
10 changes: 10 additions & 0 deletions docs/login.md
Original file line number Diff line number Diff line change
Expand Up @@ -73,6 +73,16 @@ Note that you are authenticating through SUPR, using *that* service’s login cr

It will first ask for your current password. Type in that and press enter. Then type in the new password, enter, and repeat. You have changed the password.

## Get the material

!!! Exercise "Exercise"

If you have not already created a directory under the project storage and downloaded the material there, now is a good time to do so!

1. After logging in, change directory to ``/proj/nobackup/intro-hpc2n``.
2. Create a subdirectory for yourself, if you have not already done so.
3. Change to the subdirectory you just created.
4. Clone the material from GitHub: ``git clone https://github.com/hpc2n/intro-course.git``

## File transfers

Expand Down
2 changes: 1 addition & 1 deletion docs/projectsaccounts.md
Original file line number Diff line number Diff line change
Expand Up @@ -65,6 +65,6 @@ When you have a project / have become member of a project, you can apply for an

Your account request will be processed within a week. You will then get an email with information about logging in and links to getting started information.

More information on the account process can be found on HPC2N's documentation pages: [https://www.hpc2n.umu.se/documentation/access-and-accounts/users](https://www.hpc2n.umu.se/documentation/access-and-accounts/users)
More information on the account process can be found on HPC2N's documentation pages: <a href="https://docs.hpc2n.umu.se/documentation/accounts-rules/" target="_blank">https://docs.hpc2n.umu.se/documentation/accounts-rules/</a>.


0 comments on commit 3146c8c

Please sign in to comment.