Update utils.py

Fixed the import and call to kvlReadCompressionLookupTable, was previously pointing to gems, but the functionality appears to have been moved to samseg.io
freesurfer · Jul 9, 2024 · e24857b · e24857b
1 parent ccafc44
commit e24857b
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/samseg/subregions/utils.py b/samseg/subregions/utils.py
@@ -2,7 +2,7 @@
 import scipy.ndimage
 import numpy as np
 import surfa as sf
-from samseg import gems
+from samseg.io import kvlReadCompressionLookupTable
 
 
 def run(cmd):
@@ -36,7 +36,7 @@ def read_compression_lookup_table(filename):
     object down the road.
     """
     labelMapping = sf.LabelLookup()
-    labels, names, colors = gems.kvlReadCompressionLookupTable(filename)
+    labels, names, colors = kvlReadCompressionLookupTable(filename)
     labels = np.array(labels)
     for label, name, color in zip(labels, names, colors):
         labelMapping[label] = (name, color)