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Switched to cibuildwheel to get the wheel name correct on macos, fixe… #97

Switched to cibuildwheel to get the wheel name correct on macos, fixe…

Switched to cibuildwheel to get the wheel name correct on macos, fixe… #97

Workflow file for this run

name: MacOS Build
on:
push:
branches: [ dev, itk_update ]
tags:
- v*
pull_request:
branches: [ dev ]
workflow_dispatch:
jobs:
example_matrix:
strategy:
matrix:
os: [macos-latest, macos-13]
python-version: ["3.8", "3.9", "3.10", "3.11"]
runs-on: ${{ matrix.os }}
steps:
- name: Checkout code
uses: actions/checkout@v4
- name: Set up python versions ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Checkout submodules
run: |
git submodule init
git submodule update
- name: Build zlib
run: |
git clone https://github.com/madler/zlib.git
mkdir zlib-build
cd zlib-build
cmake ../zlib -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=../zlib-install
make install
cd ..
- name: Build ITK
run: |
mkdir ITK-build
cd ITK-build
cmake \
-DBUILD_SHARED_LIBS=OFF \
-DBUILD_TESTING=OFF \
-DBUILD_EXAMPLES=OFF \
-DCMAKE_BUILD_TYPE=Release \
-DCMAKE_INSTALL_PREFIX=../ITK-install \
../ITK
make install
cd ..
- name: Detect if arm and set build variable if yes
if: runner.arch == 'ARM64' || runner.arch == 'ARM64'
run: |
IS_ARM=ON
- name: Build samseg for python version ${{ matrix.python-version }} and test
run: |
# cpython version string representation, e.g., 3.11 -> cp311
PYTHON_VERSION_STR=$(python -c "import sys; print(f'cp{sys.version_info.major}{sys.version_info.minor}')")
python -m pip install cibuilwheel
python -m cibuildwheel --output-dir ./dist
rm samseg/gems/*.so
env:
CIBW_BUILD: ${{ PYTHON_VERSION_STR }}-*

Check failure on line 72 in .github/workflows/macos.yml

View workflow run for this annotation

GitHub Actions / MacOS Build

Invalid workflow file

The workflow is not valid. .github/workflows/macos.yml (Line: 72, Col: 21): Unrecognized named-value: 'PYTHON_VERSION_STR'. Located at position 1 within expression: PYTHON_VERSION_STR
CIBW_BUILD_FRONTEND: "pip; args: --no-deps" # additional args
MACOSX_DEPLOYMENT_TARGET: "14.0"
ITK_DIR: ITK-install
ZLIB_INCLUDE_DIR: zlib-install/include
ZLIB_LIBRARY: zlib-install/lib/libz.a
APPLE_ARM64: $IS_ARM
- name: Install the wheel and test dependencies
run: |
python -m pip install samseg -f ./dist
python -m pip install pytest
python -m pip install tensorflow
- name: Test the installation
run: |
python -m pytest samseg/tests
- name: Upload artifact
uses: actions/upload-artifact@v4
with:
name: macos-wheels
path: dist/*.whl
- name: Upload to PyPI
if: ${{ github.event_name == 'push' && startsWith(github.ref, 'refs/tags') }}
run: |
$PYTHON -m pip install twine
$PYTHON -m twine upload dist/*.whl -u __token__ -p "$PASSWORD"
env:
PASSWORD: ${{ secrets.PYPI_TOKEN }}
PYTHON: /Library/Frameworks/Python.framework/Versions/3.8/bin/python3