Calcium sensor analysis

Codebase for the analysis in our paper An updated suite of viral vectors for in vivo calcium imaging using intracerebral and retro-orbital injections

Overview

sensor_analysis.ipynb
Contains the analysis for

• correlations between raw fluorescence and neuropil,
• signal-to-noise ratio, and
• signal intensity

for all the different calcium indicators.

soma_axon.ipynb
Contains the analysis of the soma-axon pair correlations.