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Optional stitching of first-pass multi-tile acquisitions #177

Optional stitching of first-pass multi-tile acquisitions

Optional stitching of first-pass multi-tile acquisitions #177

Workflow file for this run

# SPDX-FileCopyrightText: 2023 Friedrich Miescher Institute for Biomedical Research (FMI), Basel (Switzerland)
#
# SPDX-License-Identifier: MIT
name: test
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
concurrency:
group: test-${{ github.head_ref }}
cancel-in-progress: true
env:
PYTHONUNBUFFERED: "1"
FORCE_COLOR: "1"
jobs:
run:
name: Python ${{ matrix.python-version }} on ${{ startsWith(matrix.os, 'macos-') && 'macOS' || startsWith(matrix.os, 'windows-') && 'Windows' || 'Linux' }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, windows-latest, macos-latest]
python-version: ['3.9', '3.10', '3.11', '3.12']
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install Hatch
run: pip install --upgrade hatch
- name: Run tests
run: hatch run cov --cov-report xml
- name: Upload coverage reports to Codecov
uses: codecov/codecov-action@v3
with:
token: ${{ secrets.CODECOV_TOKEN }}