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Update tool/resource_list.yaml (#1551)
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Co-authored-by: bedroesb <[email protected]>
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github-actions[bot] and bedroesb authored Oct 28, 2024
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Showing 1 changed file with 15 additions and 10 deletions.
25 changes: 15 additions & 10 deletions _data/tool_and_resource_list.yml
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- description: NCBI Pathogen Detection integrates bacterial and fungal pathogen genomic sequences from numerous ongoing surveillance and research efforts whose sources include food, environmental sources such as water or production facilities, and patient samples. Foodborne, hospital-acquired, and other clinically infectious pathogens are included.
id: pathogen-detection
name: Pathogen Detection
registry:
tess: Pathogen Detection
url: https://www.ncbi.nlm.nih.gov/pathogens/
- description: The COVID-19 Data Portal enables researchers to upload, access and analyse COVID-19 related reference data and specialist datasets. The aim of the COVID-19 Data Portal is to facilitate data sharing and analysis, and to accelerate coronavirus research. The portal includes relevant datasets submitted to EMBL-EBI as well as other major centres for biomedical data. The COVID-19 Data Portal is the primary entry point into the functions of a wider project, the European COVID-19 Data Platform.
id: covid-19-data-portal
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tess: COVID-19 Data Portal
url: https://www.covid19dataportal.org/
- description: The Disease Ontology has been developed as a standardised ontology for human disease to provide the biomedical community with consistent, reusable and sustainable descriptions of human disease terms, phenotype characteristics, underlying mechanisms and related medical vocabulary disease concepts.
name: Disease Ontology (DOID)
id: doid
url: http://www.disease-ontology.org
name: Disease Ontology (DOID)
registry:
fairsharing: 8b6wfq
url: http://www.disease-ontology.org
- description: The Genomic Epidemiology Ontology (GenEpiO) covers vocabulary necessary to identify, document and research food-borne pathogens, infectious disease surveillance and outbreak investigations.
name: Genomic Epidemiology Ontology (GenEpiO)
id: genepio
url: https://genepio.org/
name: Genomic Epidemiology Ontology (GenEpiO)
registry:
fairsharing: y1mmbv
url: https://genepio.org/
- description: PATO is an ontology of phenotypic qualities, intended for use primarily in phenotype annotation.
name: Phenotypic QualiTy Ontology (PATO)
id: pato
url: https://github.com/pato-ontology/pato/
name: Phenotypic QualiTy Ontology (PATO)
registry:
biotools: pato
fairsharing: ezwdhz
url: https://github.com/pato-ontology/pato/
- description: ChEBI) is a dictionary describing small chemical compounds including distinct synthetic or natural atoms, molecules, ions, ion pairs, radicals, radical ions, complexes, and conformers.
name: Chemical Entities of Biological Interest (ChEBI)
id: chebi
url: https://www.ebi.ac.uk/chebi/
name: Chemical Entities of Biological Interest (ChEBI)
registry:
biotools: chebi
fairsharing: 62qk8w
tess: Chemical Entities of Biological Interest (ChEBI)
url: https://www.ebi.ac.uk/chebi/
- description: Uberon is an integrated cross-species anatomy ontology covering animals and bridging multiple species-specific ontologies.
name: UBER anatomy ONtology (UBERON)
id: uberon
url: http://uberon.org/
name: UBER anatomy ONtology (UBERON)
registry:
fairsharing: 4c0b6b
url: http://uberon.org/

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