A collection of my scripts and work with COVID-19 open data.
Data is NOT provided with the repository, and must be downloaded.
SRAG data is available in the Ministry of Health of Brazil opendata website.
The 2020 csv (INFLUD-day-month-2020.csv) can be downloaded here.
The 2021 csv (INFLUD-day-month-2021.csv) can be downloaded here.
Vaccine data is available here and should be renamed to match "data/vacina_parcial {date}.csv". Check VaccineCleanData.R for more information.
Data from COVID-19 Data Repository by the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University was also used (files 'time_series_covid19_confirmed_global.csv' and 'time_series_covid19_deaths_global.csv').
These files are supposed to be in the folder 'data'.
R package coronabr was also used.