edits, update prefix.cc.json

eccenca · Jul 22, 2024 · 36a97b1 · 36a97b1
1 parent 9e7f37d
commit 36a97b1
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Showing 2 changed files with 9 additions and 8 deletions.
diff --git a/cmem_plugin_shapes/plugin_shapes.py b/cmem_plugin_shapes/plugin_shapes.py
@@ -193,10 +193,9 @@ def get_class_dict(self) -> dict:
 
     def make_shapes(self, shapes_graph: Graph) -> Graph:
         """Make shapes"""
-        prop_uuids = []
         class_uuids = []
-        class_dict = self.get_class_dict()
-        for cls, props in class_dict.items():
+        prop_uuids = []
+        for cls, props in self.get_class_dict().items():
             class_uuid = uuid5(NAMESPACE_URL, cls)
             node_shape_uri = URIRef(f"{format_namespace(self.shapes_graph_iri)}{class_uuid}")
             if class_uuid not in class_uuids:
@@ -250,12 +249,12 @@ def import_shapes_graph(self) -> None:
 
     def execute(self, inputs: tuple, context: ExecutionContext) -> None:  # noqa: ARG002
         """Execute plugin"""
-        self.context = context
         setup_cmempy_user_access(context.user)
-        self.dp_api_endpoint = get_dp_api_endpoint()
-        self.prefixes = self.get_prefixes()
         if not self.overwrite and self.shapes_graph_iri in [i["iri"] for i in get_graphs_list()]:
             raise ValueError(f"Graph <{self.shapes_graph_iri}> already exists")
+        self.context = context
+        self.dp_api_endpoint = get_dp_api_endpoint()
+        self.prefixes = self.get_prefixes()
         shapes_graph = self.init_shapes_graph()
         shapes_graph = self.make_shapes(shapes_graph)
         nt_file = BytesIO(shapes_graph.serialize(format="nt", encoding="utf-8"))

diff --git a/cmem_plugin_shapes/prefix.cc.json b/cmem_plugin_shapes/prefix.cc.json
@@ -29,6 +29,7 @@
   "adw": "https://animaldiversity.org/accounts/",
   "aec3po": "https://w3id.org/lbd/aec3po/",
   "aeo": "http://purl.obolibrary.org/obo/AEO_",
+  "aero": "http://purl.obolibrary.org/obo/AERO_",
   "aerols": "http://xmlns.com/aerols/0.1/",
   "aers": "http://aers.data2semantics.org/resource/",
   "aersv": "http://aers.data2semantics.org/vocab/",
@@ -92,6 +93,7 @@
   "apf": "http://jena.apache.org/ARQ/property#",
   "api": "http://purl.org/linked-data/api/vocab#",
   "apivc": "http://purl.org/linked-data/api/vocab#",
+  "apmwg": "http://apmwg.ovh/",
   "apo": "http://purl.obolibrary.org/obo/APO_",
   "apods": "http://activitypods.org/ns/core#",
   "apollosv": "http://purl.obolibrary.org/obo/APOLLO_SV_",
@@ -1037,7 +1039,7 @@
   "gg": "http://www.gemeentegeschiedenis.nl/gg-schema#",
   "ggbn": "http://data.ggbn.org/schemas/ggbn/terms/",
   "ghga": "http://w3id.org/ghga/",
-  "gist": "https://ontologies.semanticarts.com/o/gistCore#",
+  "gist": "http://ontologies.semanticarts.com/gist#",
   "giving": "http://ontologi.es/giving#",
   "gl": "http://schema.geolink.org/",
   "gldp": "http://www.w3.org/ns/people#",
@@ -1085,7 +1087,7 @@
   "gridworks": "http://purl.org/net/opmv/types/gridworks#",
   "grs": "http://www.georss.org/georss/",
   "grscicoll": "https://www.gbif.org/grscicoll/collection/",
-  "gs1": "http://gs1.org/voc/",
+  "gs1": "https://ref.gs1.org/voc/",
   "gso": "http://www.w3.org/2006/gen/ont#",
   "gsp": "http://www.opengis.net/ont/geosparql#",
   "gt": "https://vocab.eccenca.com/geniustex/",