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| // SPDX-FileCopyrightText: 2006-2024, Knut Reinert & Freie Universität Berlin | ||
| // SPDX-FileCopyrightText: 2016-2024, Knut Reinert & MPI für molekulare Genetik | ||
| // SPDX-FileCopyrightText: 2006-2023, Knut Reinert & Freie Universität Berlin | ||
| // SPDX-FileCopyrightText: 2016-2023, Knut Reinert & MPI für molekulare Genetik | ||
| // SPDX-License-Identifier: CC0-1.0 | ||
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| #include <tdl/tdl.h> | ||
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| int main(int argc, char** argv) { | ||
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| auto toolInfo = tdl::ToolInfo{ | ||
| .metaInfo = | ||
| {.version = "7.6.5", // version of your tool | ||
| .name = "testApp", // name of your tool | ||
| .docurl = "example.com", // url to the documentation of your tool | ||
| .category = "sequence analysis", //!TODO what are good categories? | ||
| .description = "awesome tool! does everything", // a description of your tool | ||
| .executableName = argv[0], // executable name of your tool, we advise to fill it with what ever is given in argv[0] | ||
| // A list of citations you would like people to look at when they use your tool for research | ||
| .citations = {{"doi:123", "https://en.wikipedia.org/wiki/Meaning_of_life"}, | ||
| {"doi:456", "https://en.wikipedia.org/wiki/Turing_completeness"}}}, | ||
| .params = | ||
| {// allow a call like `./myTool build --input <file1> <file2>` | ||
| tdl::Node{ | ||
| .name = "build", | ||
| .description = "builds some index for search", | ||
| .tags = {}, // no tags | ||
| .value = tdl::Node::Children{tdl::Node{ | ||
| .name = "input", // This must be the same as the referenceName of CLIMapping | ||
| .description = "input file", | ||
| .value = tdl::StringValueList{}, // indicates that we are accepting a list of strings as values | ||
| }}}, | ||
| auto toolInfo = tdl::ToolInfo { | ||
| .metaInfo = { | ||
| .version = "7.6.5", // version of your tool | ||
| .name = "testApp", // name of your tool | ||
| .docurl = "example.com", // url to the documentation of your tool | ||
| .category = "sequence analysis", //!TODO what are good categories? | ||
| .description = "awesome tool! does everything", // a description of your tool | ||
| .executableName = argv[0], // executable name of your tool, we advise to fill it with what ever is given in argv[0] | ||
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| // allow a call like `./myTool search --index myindex.db --queries <file1> <file2>` | ||
| tdl::Node{.name = "search", | ||
| .description = "using index to search", | ||
| .value = | ||
| tdl::Node::Children{tdl::Node{ | ||
| .name = | ||
| "queries", // This must be the same as the referenceName of CLIMapping | ||
| .description = "files with search queries", | ||
| .value = tdl::StringValueList{}, // indicates that we are accepting a list of strings as values | ||
| }, | ||
| tdl::Node{ | ||
| .name = "index", // This must be the same as the referenceName of CLIMapping | ||
| .description = "path to an index file", | ||
| .value = tdl::StringValue{}, // indicates that we are accepting a single string value | ||
| }}}}, | ||
| .cliMapping = { | ||
| tdl::CLIMapping{.optionIdentifier = "--input", .referenceName = "input"}, | ||
| tdl::CLIMapping{.optionIdentifier = "--index", .referenceName = "index"}, | ||
| tdl::CLIMapping{.optionIdentifier = "--queries", .referenceName = "queries"}, | ||
| }}; | ||
| // A list of citations you would like people to look at when they use your tool for research | ||
| .citations = {{"doi:123", "https://en.wikipedia.org/wiki/Meaning_of_life"}, | ||
| {"doi:456", "https://en.wikipedia.org/wiki/Turing_completeness"}} | ||
| }, | ||
| .params = { | ||
| // allow a call like `./myTool build --input <file1> <file2>` | ||
| tdl::Node { | ||
| .name = "build", | ||
| .description = "builds some index for search", | ||
| .tags = {}, // no tags | ||
| .value = tdl::Node::Children { | ||
| tdl::Node { | ||
| .name = "input", // This must be the same as the referenceName of CLIMapping | ||
| .description = "input file", | ||
| .value = tdl::StringValueList{}, // indicates that we are accepting a list of strings as values | ||
| }} | ||
| }, | ||
|
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| // allow a call like `./myTool search --index myindex.db --queries <file1> <file2>` | ||
| tdl::Node { | ||
| .name = "search", | ||
| .description = "using index to search", | ||
| .value = tdl::Node::Children { | ||
| tdl::Node { | ||
| .name = "queries", // This must be the same as the referenceName of CLIMapping | ||
| .description = "files with search queries", | ||
| .value = tdl::StringValueList{}, // indicates that we are accepting a list of strings as values | ||
| }, | ||
| tdl::Node { | ||
| .name = "index", // This must be the same as the referenceName of CLIMapping | ||
| .description = "path to an index file", | ||
| .value = tdl::StringValue{}, // indicates that we are accepting a single string value | ||
| } | ||
| } | ||
| } | ||
| }, | ||
| .cliMapping = { | ||
| tdl::CLIMapping {.optionIdentifier = "--input", .referenceName = "input"}, | ||
| tdl::CLIMapping {.optionIdentifier = "--index", .referenceName = "index"}, | ||
| tdl::CLIMapping {.optionIdentifier = "--queries", .referenceName = "queries"}, | ||
| }}; | ||
| } |