[INFRA] Update Dependencies and CI #81

	# SPDX-FileCopyrightText: 2006-2024, Knut Reinert & Freie Universität Berlin
	# SPDX-FileCopyrightText: 2016-2024, Knut Reinert & MPI für molekulare Genetik
	# SPDX-License-Identifier: CC0-1.0

	name: Windows MinGW

	on:
	push:
	branches:
	- 'main'
	pull_request:
	workflow_dispatch:

	concurrency:
	group: mingw-${{ github.event.pull_request.number \|\| github.ref }}
	cancel-in-progress: ${{ github.event_name != 'push' }}

	env:
	TZ: Europe/Berlin

	defaults:
	run:
	shell: bash -Eeuxo pipefail {0}

	jobs:
	build:
	name: ${{ matrix.name }}
	runs-on: windows-2022
	if: github.repository_owner == 'deNBI-cibi' \|\| github.event_name == 'workflow_dispatch'
	strategy:
	fail-fast: false
	matrix:
	include:
	- name: "Latest"
	build_type: Release
	steps:
	- name: Checkout
	uses: actions/checkout@v4

	- name: Export configs
	run: \|
	echo "GNUMAKEFLAGS=-j$(getconf _NPROCESSORS_ONLN) --no-print-directory --output-sync=target" >> "${GITHUB_ENV}"
	echo "MAKEFLAGS=-j$(getconf _NPROCESSORS_ONLN) --no-print-directory --output-sync=target" >> "${GITHUB_ENV}"

	- name: Configure tests
	run: \|
	mkdir build && cd build
	cmake ../ -G "MinGW Makefiles" \
	-DCMAKE_BUILD_TYPE=${{ matrix.build_type }} \
	-DCMAKE_CXX_FLAGS="-Wall -Wextra -pedantic -Werror -Wa,-mbig-obj"

	- name: Build tests
	working-directory: build
	run: make -k

	- name: Run tests
	working-directory: build
	run: PATH="/c/mingw64/bin/:${PATH}" ctest . -j --output-on-failure

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