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update notebooks, roms_tools and pre-commit versions
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dafyddstephenson authored and “Dafydd committed Oct 23, 2024
1 parent e827e82 commit 1c151fc
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Showing 6 changed files with 141 additions and 229 deletions.
2 changes: 1 addition & 1 deletion ci/environment.yml
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ dependencies:
- pytest
- pip
# testing
- pre-commit
- pre-commit==3.8.0
- coverage
- pytest
# docs
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2 changes: 1 addition & 1 deletion ci/environment_hpc.yml
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Expand Up @@ -8,7 +8,7 @@ dependencies:
- netCDF4
- pip
# testing
- pre-commit
- pre-commit==3.8.0
- coverage
- pytest
# docs
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161 changes: 29 additions & 132 deletions docs/2_importing_and_running_a_case.ipynb

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187 changes: 101 additions & 86 deletions docs/3_restarting_and_continuing_a_case.ipynb

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14 changes: 7 additions & 7 deletions examples/alpha_example/cstar_blueprint_alpha_example.yaml
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Expand Up @@ -45,20 +45,20 @@ components:
- "marbl_diagnostic_output_list"
model_grid:
location: 'https://github.com/CWorthy-ocean/cstar_blueprint_roms_marbl_example/raw/cstar_alpha/roms_tools_yaml_files/roms_grd.yaml'
file_hash: '3dae89176cfb9f4e91591266da451a7a2accd43ef39a3ab6701c46f42f5e4690'
file_hash: 'f807a71fa424bb5bf481dd6cf5cbcad826a952d3e7842e39516bd21d51a5fab1'
initial_conditions:
location: 'https://github.com/CWorthy-ocean/cstar_blueprint_roms_marbl_example/raw/cstar_alpha/roms_tools_yaml_files/roms_ini.yaml'
file_hash: '1786e2d4cd321a4dad04a5ea35fefb92f508776c39643da9fb78e19dcb537988'
file_hash: '9123b7e622ce9c3fb4020817739dae743818c26ac78c84b237769144412ee171'
tidal_forcing:
location: 'https://github.com/CWorthy-ocean/cstar_blueprint_roms_marbl_example/raw/cstar_alpha/roms_tools_yaml_files/roms_tides.yaml'
file_hash: '3ea029d46edbd5e145f4aba959e4fd3db7beceb3150c7a330be3b88f993253b5'
file_hash: '07058b7c52422dd0c400217cddb407977eae07ded3e2a10d61cf357bed1dfef8'
boundary_forcing:
- location: 'https://github.com/CWorthy-ocean/cstar_blueprint_roms_marbl_example/raw/cstar_alpha/roms_tools_yaml_files/roms_bry.yaml'
file_hash: '940f84b558ee609fe2165a2acfdd6038c024c241e17a20078d98ce7c51f76f2c'
file_hash: 'c9644d93549ed20212b47e5cb6bb760f1810d3282072c6dac7a91fa08efc730c'
- location: 'https://github.com/CWorthy-ocean/cstar_blueprint_roms_marbl_example/raw/cstar_alpha/roms_tools_yaml_files/roms_bry_bgc.yaml'
file_hash: '409f8750604d74afa657511890a76a13a9df0775a928f23f2f5b6da32c83e43d'
file_hash: '9f5587c53299206eaeb06b7eedb3fac99131ab4d8c477cf4836c1b35c15706b6'
surface_forcing:
- location: 'https://github.com/CWorthy-ocean/cstar_blueprint_roms_marbl_example/raw/cstar_alpha/roms_tools_yaml_files/roms_frc.yaml'
file_hash: '20746eda08c5da9b2ae4d2af3b981f21fe5ab2f11bc197916ce6da55c0547417'
file_hash: '4c3efd64abd224bdd64800eba38414d4a98bfb425158300d361676403dbf4ddf'
- location: 'https://github.com/CWorthy-ocean/cstar_blueprint_roms_marbl_example/raw/cstar_alpha/roms_tools_yaml_files/roms_frc_bgc.yaml'
file_hash: 'a7eea7e73ea34da250f071c13e3bd8c598cfb775136653756528d74191f8988a'
file_hash: '834a16968abdb890aa37e2e130c267d119f3fac40dc0d2ccca35a52a9223155a'
4 changes: 2 additions & 2 deletions pyproject.toml
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Expand Up @@ -27,15 +27,15 @@ dependencies = [
"python-dateutil>=2.8.2",
"PyYAML==6.0.2",
"pooch>=1.8.1",
"roms_tools[dask]>=1.4.0"
"roms_tools[dask]>=1.4.2"
]

keywords = ["MCDR", "CDR", "ocean carbon", "climate"]

[project.optional-dependencies]
test = [
"pytest>=7.0",
"roms_tools[dask]==1.4.0"
"roms_tools[dask]==1.4.2"
]
dev =[]

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