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Use mzdata::mz_read, adding support for gzipped MGF and mzML, and for Thermo raw and mzMLb #29

Use mzdata::mz_read, adding support for gzipped MGF and mzML, and for Thermo raw and mzMLb

Use mzdata::mz_read, adding support for gzipped MGF and mzML, and for Thermo raw and mzMLb #29

Workflow file for this run

name: Test
on:
push:
branches:
- main
pull_request:
workflow_dispatch:
# Make sure CI fails on all warnings, including Clippy lints
env:
RUSTFLAGS: "-Dwarnings"
jobs:
clippy_check:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Install stable toolchain
uses: actions-rs/toolchain@v1
with:
profile: minimal
toolchain: stable
override: true
- name: Run Clippy
uses: actions-rs/cargo@v1
with:
command: clippy
args: --all-targets --all-features
pytest:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
steps:
- uses: actions/checkout@v4
- name: Install Python
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Install package and dependencies
run: |
python -m pip install --upgrade pip
pip install .[test]
- name: Run tests
run: |
pytest