Use mzdata::mz_read
, adding support for gzipped MGF and mzML, and for Thermo raw and mzMLb
#29
Workflow file for this run
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name: Test | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
workflow_dispatch: | |
# Make sure CI fails on all warnings, including Clippy lints | |
env: | |
RUSTFLAGS: "-Dwarnings" | |
jobs: | |
clippy_check: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Install stable toolchain | |
uses: actions-rs/toolchain@v1 | |
with: | |
profile: minimal | |
toolchain: stable | |
override: true | |
- name: Run Clippy | |
uses: actions-rs/cargo@v1 | |
with: | |
command: clippy | |
args: --all-targets --all-features | |
pytest: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
os: [ubuntu-latest, macos-latest, windows-latest] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Install Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.10" | |
- name: Install package and dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install .[test] | |
- name: Run tests | |
run: | | |
pytest |