SNV frequency-based substitution matrix construction for CRAM writer #947
Workflow file for this run
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| name: lint | |
| on: [push, pull_request] | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name : master base sha | |
| id : master_base_sha | |
| if : github.ref == 'refs/heads/master' | |
| run: echo "base_sha=${{ github.event.before }}" >> $GITHUB_OUTPUT | |
| - uses: xcoo/[email protected] | |
| with: | |
| linters: "[\"clj-kondo\" \"kibit\" \"eastwood\"]" | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| runner: ":leiningen" | |
| base_sha: ${{ github.event.pull_request.base.sha||steps.master_base_sha.outputs.base_sha }} | |
| eastwood_linters: "[:all]" | |
| linter_options: "{:eastwood {:exclude-linters [:keyword-typos :unused-namespaces :boxed-math :reflection]}}" |