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MAINT: support capital T Taxonomy on adding metadata (#966)
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wasade authored May 8, 2024
1 parent 3f8d0c2 commit 047b5e7
Showing 1 changed file with 2 additions and 0 deletions.
2 changes: 2 additions & 0 deletions biom/table.py
Original file line number Diff line number Diff line change
Expand Up @@ -4149,6 +4149,7 @@ def axis_load(grp):

parser = defaultdict(lambda: general_parser)
parser['taxonomy'] = vlen_list_of_str_parser
parser['Taxonomy'] = vlen_list_of_str_parser
parser['KEGG_Pathways'] = vlen_list_of_str_parser
parser['collapsed_ids'] = vlen_list_of_str_parser
parser.update(parse_fs)
Expand Down Expand Up @@ -4583,6 +4584,7 @@ def to_hdf5(self, h5grp, generated_by, compress=True, format_fs=None,

formatter = defaultdict(lambda: general_formatter)
formatter['taxonomy'] = vlen_list_of_str_formatter
formatter['Taxonomy'] = vlen_list_of_str_formatter
formatter['KEGG_Pathways'] = vlen_list_of_str_formatter
formatter['collapsed_ids'] = vlen_list_of_str_formatter
formatter.update(format_fs)
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