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Update paper branch to match main #21

Merged
merged 15 commits into from
Sep 13, 2023
Merged

Update paper branch to match main #21

merged 15 commits into from
Sep 13, 2023

Commits on Sep 5, 2023

  1. Made a requirements_dev file for all dependencies and fixed version n… 

    …umber
    @JakobSonstebo
    JakobSonstebo committed Sep 5, 2023
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  2. Made a requirements_dev file and updated version nummber

    @JakobSonstebo
    JakobSonstebo committed Sep 5, 2023
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  3. Updated version numbers in requirements to match colabs preinstalled … 

    …packages
    @JakobSonstebo
    JakobSonstebo committed Sep 5, 2023
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  4. Made conda environments download dev packages for testing and bumped … 

    …torch to latest stable version
    @JakobSonstebo
    JakobSonstebo committed Sep 5, 2023
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  5. Merge pull request #13 from bioAI-Oslo/source_package_conflict 

    Source package conflict
    @JakobSonstebo
    JakobSonstebo authored Sep 5, 2023
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Commits on Sep 7, 2023

  1. Corrected parameter names in RegularStimulus from interval and durati… 

    …on to period and stop in documentation
    @JakobSonstebo
    JakobSonstebo committed Sep 7, 2023
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  2. Merge pull request #16 from bioAI-Oslo/15-documentation-not-up-to-date 

    Corrected parameter names in RegularStimulus from interval and durati…
    @JakobSonstebo
    JakobSonstebo authored Sep 7, 2023
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Commits on Sep 8, 2023

  1. Added the batch size parameter to stimuli classes in docs and example… 

    …s, included LoadedStimulus in implement_model tutorial and example and fixed typos
    @JakobSonstebo
    JakobSonstebo committed Sep 8, 2023
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  2. Added support for multi-dimensional stimulus in the LoadedStimulus class

    @JakobSonstebo
    JakobSonstebo committed Sep 8, 2023
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  3. Merge pull request #17 from bioAI-Oslo/improved_stimulus_documentation 

    Added the batch size parameter to stimuli classes in docs and example…
    @JakobSonstebo
    JakobSonstebo authored Sep 8, 2023
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  4. Merge pull request #18 from bioAI-Oslo/multidim_loaded_stimulus 

    Added support for multi-dimensional stimulus in the LoadedStimulus class
    @JakobSonstebo
    JakobSonstebo authored Sep 8, 2023
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Commits on Sep 11, 2023

  1. Added a benchmarking sections detailing memory usage and performance … 

    …of the package
    @JakobSonstebo
    JakobSonstebo committed Sep 11, 2023
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  2. Merge pull request #19 from bioAI-Oslo/benchmark_docs 

    Added a benchmarking sections detailing memory usage and performance …
    @JakobSonstebo
    JakobSonstebo authored Sep 11, 2023
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Commits on Sep 13, 2023

  1. Update poisson_glm_model.py 

    add information about the coupling filter to and changed tau to t' in the main equation to accomodate the parameter in the initialization
    @lepmik
    lepmik authored Sep 13, 2023
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  2. Merge pull request #20 from bioAI-Oslo/lepmik-patch-1 

    Update poisson_glm_model.py
    @JakobSonstebo
    JakobSonstebo authored Sep 13, 2023
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