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22 Open 16 Closed
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Issues list

MaxQuant scores
#82 opened Nov 10, 2024 by ypriverol
@ypriverol @zprobot
32
quantmsio and thermorawfileparser
#80 opened Oct 21, 2024 by ypriverol
@ypriverol
9
Standardisation of cv_terms in parquet.
#79 opened Oct 21, 2024 by ypriverol
1
@zprobot
2
inference representation at psm level.
#78 opened Oct 14, 2024 by ypriverol
1
@ypriverol @timosachsenberg @jpfeuffer
11
PSM file metadata section. documentation Improvements or additions to documentation
#77 opened Oct 14, 2024 by ypriverol
1
@timosachsenberg @daichengxin @zprobot
5
scan number or scan documentation Improvements or additions to documentation
#74 opened Oct 12, 2024 by ypriverol
1
@zprobot
2
Create the first PSM example documentation Improvements or additions to documentation good first issue Good for newcomers
#59 opened Sep 15, 2024 by ypriverol
1
@zprobot
3
Probably good to document SAGE and quantms.io compatibility enhancement New feature or request no-priority
#53 opened Sep 5, 2024 by ypriverol
1
How to store protein groups and gene groups in feature and psms files. documentation Improvements or additions to documentation enhancement New feature or request
#51 opened Sep 5, 2024 by ypriverol
11
Provide an example for a TMT, LFQ and DIA with the current representation documentation Improvements or additions to documentation enhancement New feature or request
#36 opened Jan 12, 2024 by ypriverol
3 tasks
@ypriverol @zprobot
Additional columns/examples questions documentation Improvements or additions to documentation enhancement New feature or request question Further information is requested
#35 opened Jan 9, 2024 by timosachsenberg
3 tasks
@ypriverol
2
Review of the format by additional contributors. documentation Improvements or additions to documentation enhancement New feature or request question Further information is requested
#34 opened Jan 8, 2024 by ypriverol
4 tasks
@ypriverol @daichengxin @zprobot
Implement a Json representation for quantms.io including tests
#33 opened Jan 8, 2024 by ypriverol
4 tasks done
@ypriverol @zprobot
Test the quantms.io with the largest submission reanalyzed PXD039236 enhancement New feature or request
#32 opened Jan 8, 2024 by ypriverol
@ypriverol @zprobot
Integrate quantms.io into quantms enhancement New feature or request
#31 opened Jan 8, 2024 by ypriverol
1 of 2 tasks
@zprobot
Add the first bioconda configuration and release. enhancement New feature or request
#29 opened Jan 8, 2024 by ypriverol
@zprobot
Add multiple tests to the library. enhancement New feature or request
#28 opened Jan 8, 2024 by ypriverol
@zprobot
quantms.io file format version 1.0 documentation Improvements or additions to documentation good first issue Good for newcomers
#27 opened Jan 8, 2024 by ypriverol
2 of 3 tasks
@zprobot
Error reading IBAQ file
#26 opened Dec 8, 2023 by ypriverol
I was working with one project with two factor value enhancement New feature or request
#21 opened Nov 10, 2023 by ypriverol
@zprobot
1
Logging should be replacing print enhancement New feature or request
#9 opened Sep 6, 2023 by ypriverol
@ypriverol
Embedding metadata in Parquet files?
#4 opened Aug 25, 2023 by wfondrie
1
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